Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0863 ATGGAGTTTGGGCCGGTTTCTCTAGTATTCAATTACGTAGCTCCATGTCATCAACTACTTCGGCGAGAACGTATTTCCGATACAGTCGTCTTCAACCGGCCGCGGCCACCCAGCTCTGGCACTGCGTCGTTCCACATGAAGAGCTCGTTCTGTGGCTCACTCGCTCTGTGTTCTCTTGCGAGTGCAACTACAACAGTCACCGCCACGGCCGTGCTGAACCAACCTCCGACTCTCTACACCGGCGGATCCGATGGATCAATCATCTGGTGGAAATTATCAATCTCCGATTCCAGCACGGAAATTGAACCGGTTGCTGTATTGTGTGGCCATGCTACGACAATAGCGGATGTTGGCATTTGTTACCCTGTTATCTCGGGGACGGGTAAGACAGATATTTCAAGTAATGCCGAGGTGAACTCCACTTCAGAAATTTGTGGTGCACTAGTAAGTGCGTGTTCTGATGGTGTGCTGTGCATTTGGAGCAGGAGAAGTGGACATTGCAGGCGCAGAAGAAAACTACCTGCTTGGGTTGGGAGTCCATCCATGGTGCGTACGATTCCATCGAAACCAAGATATGTATGCATTGGATGCTATTTTATTGATGGTGCTCATTCCTATGATAATCACTCAGTTGATTCTGCTGAAAGGATCGAGGTTTCAGCTGATAGAGAATATCAGCATAAAAAGCATTCCAAATGCTCTGTCGTTATTGTTGATACATATACTCTTACCATTGTTGAAACTGTTGTGCATGGAAATTTGTCTATTGGCTCCTTGAGGTATATGGCCATAGTCTCACCTTTAACGGGTGAGGGCAATTATTCAGCAGCTTTAGTTGATTCATTTGGTCGACTGCAGATGATTTCGTTATCTAAGGAGTCTGACCAGGAAGTCGATGAGGCGAGCTTGCACAATTGTTTGCAAGTGGATATTCCTGTTTGGACTGAGGTATTGAATGAGAGAGGCCAGGTTGTGTCAGTTGTGACTCAACACAATGTCATTGCCTTTTTGTTACCTGATCGTTGTGTGTTCAAGCTTTTACTCAGTGGTCTCGTGGTTGGAGAGGTTTCTTTTGTGGACAGTATTTTTGGCGTTAATGGGTTTACCACTCAAGCTCATGTTTCTGGAGCAATGTTTCTTGATGGTAGAGATGAATTGAATATCATGAATAACCAGGAATGCCATGAAACATTTGTTGAGAAATTTGCTGTGTGGAATTCTGGAGGTCATGCAATTGTCTTCATGATATCAATTACAAATAAGATATTTGAATATAAACCTCTTTATGAAATTCCTGCATCTTGTAATTCCTCACATATGGGATTGTCACTATCGTTCATTCAACTAAATCAACATCTCATCCGCATTGAATCACTTAGCTCTCAAATTGAAGAGCCTTTTCATTGGACTTCTAATATCACAATCTGGTCACTGCAAGAGAAACATCGTCTTCATGGAAAACTGTTGAAATGCAGAATGGTTGGTGAATCTAGTTCATTGACAGAATGGATTCAAGATTCTACTCACCACAGTGAATTTGCAGGGAAATATGGTGTTCCATCTGGATTGAAATCTGATTCTAGTTCTGAAAGTGTAAATGATATATATTTTGGTGACTGTAACAATTTTGTTCAGAAGGGAGAAATAATATCTTCTTCTATGGTTATTTCTGATAGTTTATCTACTCCTTATGCAGTGGTTTATGGCTACTCTAGTGGCGATGTACAAATTTTAAAACTCGATTTGTTTCAAGGGTTGTCTTCTCATAGAGGAAGTCCACACTATGAAGTGCATCATCAGGTTCCACAACTATATCTTTCAGGTCACATGGGACCTGTACTATGTTTGGCGGTTCATCGGTTAGTGAGCAAAAGTAATGAACAATTTCTATTATCTGGAAGCATGGATTGCACCATTCGAATTTGGGATCTCGAATCTGGGAATCTTGTCATGGTGATGCACCACCATGTGGCTCCTGTGAGGCAGATAATTCTTCCTCCTGCTCATGCCGACCATCCTTGGAGTGATTGTTTTCTTTCAGTTGGTGAGGATTCTTGTGTTGCTCTTGCTTCCTTAGAGACTTTAAAGGTGGAGAGAATGTTTCCTGGACATCGCAACTATCCTGAAAAAGTTGTGTGGGATAGTGTAAGAGGTTATATTGCATGCATGTGCAGTAACCATTCCAGTACTTCTGACACTGTTGATATATTGTATATTTGGGATATTAAGACGGGTGCTCGTGAGCGGATTATTCCTGGGACAGCATCTCAGTCAGTATTCGATAATTTTTGTAAAGGAATTGGCAGGAGCTTTTCTGGCCCTATTCTGAATGGAAATACCTCTGCTTCATCTCTACTCTTTACAACAGTCGAAGACGGGAGTCTTTCTAATTCTCTTTCAAGCTATGGTAAGTCCACTGATACATTAAAGGCAATGGCAGATCTGAGTAATAAGGTAGAATCACATACGTCCAACAGGCATGCTAGAAGACGGAAGTCTGCTAAATCATTTCTAAACTCTCTCTTTGATTTTGAGAGTGGAAAGCATCCCATCAAGTGCTCATGTCCATTCCCTGGGATTGCTACAATGAGCTTCGATCTTACAGCATTAATGTCTTTCAATCAGAAGTCTAGGTCATTAGCAACTAGTAGTAATCTTCAAGATACTGCAATTCCTAAGGATCAGCAAGCTAGGATATCAAGTCCCAGTGCTAGGGATAAGAAGATGGACAATTCTTTGGCCCATGAAATTTCAACCGATTATGGTGAAGAGCTTAACTGGATTAGTGTGTATGAAGAATGTTTAATTCGGTTCAGCTTGTCCTTTTTGCACGTATGGGGTGTTGACAGTGATCTTGACACTTTGCTAGTAACTGACATGAAGTTGAAAAAACCAGAGAGCTTTATGGTGGCTTCTGGTTTGCAGGGGGATAAAGGTTCACTAACAGTGTCATTTCCTGGAATGAAAGCTGTTCTTGAGCTCTGGAAGTCATCCGCAGAATTTTGTGCTATGAGGTCACTCATGATTCTGTCTCTTGCTCAGCACATGATTAGCTTGTTTCACTCAGGTTCATCTGCCAGCAGTGCGCTGGCAGCTTTCTATATGAGGAATTTTGTGGACAAAGTTCCAGATATAAAGCCACCTTTACTTCAGCTTTTAGTGAGCTTCTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCTCGTTCTTTGTTCCATTGTGCAGCTTCACGTGCAATTCCACCACCACTAAGAGGTGGAAGATCAACCGAGCATGGAAGTTCGAGTGAAATGGGAGATAGTGACACTGAACTCGATGGTTTGAGTATGAATGAGAAGTCTGATTACATGATATCATCAGACTGCATTCCTAAAAGCGAAGAGGTTTCTCAGGTTGAGGAATTCAACATCCGCTCCTGGTTAGAATCTTATGAAATGCACGATTGGATTTCTTGCGTAGGTGGAACGAGCCAAGATGCAATGACTTCTCATATTATAATTGCAGCAGCACTAGCCATTTGGTATCGCAGTCTTGTGAAGAAAAGCCTTCCAATGCTGGTTGTCCATTCATTAGTGAAGTTGGTAAAGTCCATGAACGAGAAATACAGTTCCACTGCTGCAGAGCTACTTGCTGAAGGTATGGAGAGCACATGGAAGACTTGTCTGGGTAATGAAATTCCTCATCTCATTGAAGATGTATTACTCCAGCTGGAATATGTGAGTGGTCCGTCTGCAAATCAGTTAGTTCAAAATTCATCCCTTCCAGTGGGCATTCGCGAAACTTTGGTTGAAGTTCTTCTCCCAAATCTAGCAATGGCCGATATACCAGGATTCTTGACAGTAATAGAAAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTTCATCTGGTGTCACTTAGGACACTGATCAGGGTTGTGCGTGGTTGTCCTAGAAGCCTGGCACCATATCTGGACAAGGCTGTTAACTTTATTTTGCAAATCATGGACCCGAGCAACTCAGTCATGCGCAAAATTTGTTATCAGAGCTCAATGTCTGCTCTAAAGGAAGTTGTGCATGTCTTTCCAATGGTATCGTTAAATGATTCATGGACCAGATTGGCAGTTGGTGATGTTATTGGAGAGATTAACAGTGCTAGCATTCGTGTATATGATCTACAGAGTGTTACAAAGATTAAGGTTTTGGATGCAACTGGACCTCCTGGACTTCCAAGTTTGCTTCCAGCAGGTTCAGAAATGCCTTTAAGGATCTCAATATCAGCTCTGAGCTTTTCCCCTGATGGCGAGGGGGTTGTTGCCTTTTCTGAACATGGCTTAATGATCCGATGGTGGTCACTGGGATCTGTATGGTGGGAGAAACTAAGCCGCAACTTTGTTCCTGTTCAATGCACAAAAGTGATATTTGTTCCTCCATGGGAAGGATTCTCGCCCAATTCTTCAAGGTTAAGCATTATGGCGAGTGCAACAGAACGTGATAGGCAAGCAGACGTGCAGGACAATGTAAGGGGCTTGAGTCATGCAGACTTTTTGAAGATTTTGATTCATAGTCTCGATCTTTCTTATCGGCTAGAATGGACTGATGAGCGAAAACTAAAACTCACACGACATGGCAATGAGTTGGGAACTTTTCAAATATAA 4638 42.35 MEFGPVSLVFNYVAPCHQLLRRERISDTVVFNRPRPPSSGTASFHMKSSFCGSLALCSLASATTTVTATAVLNQPPTLYTGGSDGSIIWWKLSISDSSTEIEPVAVLCGHATTIADVGICYPVISGTGKTDISSNAEVNSTSEICGALVSACSDGVLCIWSRRSGHCRRRRKLPAWVGSPSMVRTIPSKPRYVCIGCYFIDGAHSYDNHSVDSAERIEVSADREYQHKKHSKCSVVIVDTYTLTIVETVVHGNLSIGSLRYMAIVSPLTGEGNYSAALVDSFGRLQMISLSKESDQEVDEASLHNCLQVDIPVWTEVLNERGQVVSVVTQHNVIAFLLPDRCVFKLLLSGLVVGEVSFVDSIFGVNGFTTQAHVSGAMFLDGRDELNIMNNQECHETFVEKFAVWNSGGHAIVFMISITNKIFEYKPLYEIPASCNSSHMGLSLSFIQLNQHLIRIESLSSQIEEPFHWTSNITIWSLQEKHRLHGKLLKCRMVGESSSLTEWIQDSTHHSEFAGKYGVPSGLKSDSSSESVNDIYFGDCNNFVQKGEIISSSMVISDSLSTPYAVVYGYSSGDVQILKLDLFQGLSSHRGSPHYEVHHQVPQLYLSGHMGPVLCLAVHRLVSKSNEQFLLSGSMDCTIRIWDLESGNLVMVMHHHVAPVRQIILPPAHADHPWSDCFLSVGEDSCVALASLETLKVERMFPGHRNYPEKVVWDSVRGYIACMCSNHSSTSDTVDILYIWDIKTGARERIIPGTASQSVFDNFCKGIGRSFSGPILNGNTSASSLLFTTVEDGSLSNSLSSYGKSTDTLKAMADLSNKVESHTSNRHARRRKSAKSFLNSLFDFESGKHPIKCSCPFPGIATMSFDLTALMSFNQKSRSLATSSNLQDTAIPKDQQARISSPSARDKKMDNSLAHEISTDYGEELNWISVYEECLIRFSLSFLHVWGVDSDLDTLLVTDMKLKKPESFMVASGLQGDKGSLTVSFPGMKAVLELWKSSAEFCAMRSLMILSLAQHMISLFHSGSSASSALAAFYMRNFVDKVPDIKPPLLQLLVSFWQDESEHVRMAARSLFHCAASRAIPPPLRGGRSTEHGSSSEMGDSDTELDGLSMNEKSDYMISSDCIPKSEEVSQVEEFNIRSWLESYEMHDWISCVGGTSQDAMTSHIIIAAALAIWYRSLVKKSLPMLVVHSLVKLVKSMNEKYSSTAAELLAEGMESTWKTCLGNEIPHLIEDVLLQLEYVSGPSANQLVQNSSLPVGIRETLVEVLLPNLAMADIPGFLTVIESQIWSTASDSPVHLVSLRTLIRVVRGCPRSLAPYLDKAVNFILQIMDPSNSVMRKICYQSSMSALKEVVHVFPMVSLNDSWTRLAVGDVIGEINSASIRVYDLQSVTKIKVLDATGPPGLPSLLPAGSEMPLRISISALSFSPDGEGVVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERDRQADVQDNVRGLSHADFLKILIHSLDLSYRLEWTDERKLKLTRHGNELGTFQI 1545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21157700 21185946 + CePI673135_07g008630.1 Cec07g0863 207642

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0863 1545 ProSitePatterns Trp-Asp (WD) repeats signature. 630 644 IPR019775 -
Cec07g0863 1545 MobiDBLite consensus disorder prediction 884 910 - -
Cec07g0863 1545 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 606 648 - -
Cec07g0863 1545 Gene3D - 579 852 IPR015943 GO:0005515(InterPro)
Cec07g0863 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 606 652 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 PANTHER RABCONNECTIN-3B, ISOFORM A 62 1545 IPR049916 GO:0005737(PANTHER)
Cec07g0863 1545 Gene3D - 24 296 IPR015943 GO:0005515(InterPro)
Cec07g0863 1545 Pfam WD domain, G-beta repeat 604 643 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 MobiDBLite consensus disorder prediction 884 899 - -
Cec07g0863 1545 SMART WD40_4 52 91 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SMART WD40_4 599 643 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SMART WD40_4 694 741 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SMART WD40_4 1411 1445 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SMART WD40_4 100 161 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SMART WD40_4 646 691 IPR001680 GO:0005515(InterPro)
Cec07g0863 1545 SUPERFAMILY WD40 repeat-like 56 753 IPR036322 GO:0005515(InterPro)
Cec07g0863 1545 MobiDBLite consensus disorder prediction 1082 1103 - -
Cec07g0863 1545 SUPERFAMILY ARM repeat 1006 1357 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0863 K24738 - - csv:101221785 2639.37
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g47 . Blo03g00223 Bda06g00120 . . Bpe07g00097 . . . . . . . . . . . . . . . . . . Cla07g00745 Cam07g0798 Cec07g0863 Cco07g0835 Clacu07g0778 Cmu07g0786 Cre07g1139 . . Cone6ag0814 Cone9ag0813 . . . Cme07g01612 . . . . . . . Bma12g00068 . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00613 Chy07g01198 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007130 1 2 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 3 1 37