Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g0864 ATGGGAACTTCTTCATTGATTAATAATTGTGAAATTGATTGGGATGGGCTTTTTTCTGGATCATCTTGTTTGAGTAATATAGAGATGGAGAAGGGAATTTGTGGAAGTGAGGATCACGTTATTGCAGCAATGGGAGATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGTGATATTGGTGGAGGGAAGAATAATTGTAATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGCAATCATCCTAGGAGCTATTACCGGTGTACACATCACACATGCAACGTTAAGAAACAAATTCAAAGGCACGCCAAGGATCCGACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTTAAGCAATTGCAGTTCCTTTCTGGCATTTAG 531 39.74 MGTSSLINNCEIDWDGLFSGSSCLSNIEMEKGICGSEDHVIAAMGDYDNVVNIGGIKEGDIGGGKNNCNKGKMVMGKRRSAMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHAKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21187244 21189445 - CePI673135_07g008640.1 Cec07g0864 207643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g0864 176 SUPERFAMILY WRKY DNA-binding domain 90 156 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0864 176 Gene3D WRKY domain 81 156 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0864 176 SMART WRKY_cls 97 156 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0864 176 ProSiteProfiles WRKY domain profile. 92 157 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g0864 176 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 155 IPR044810 GO:0003700(InterPro)
Cec07g0864 176 FunFam WRKY transcription factor 57 83 157 - -
Cec07g0864 176 Pfam WRKY DNA -binding domain 98 155 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0149 Cec-Chr5:1243502 Cec07g0864 Cec-Chr7:21187244 4.60E-37 dispersed
Cec07g0864 Cec-Chr7:21187244 Cec07g1664 Cec-Chr7:32229530 5.30E-30 dispersed
Cec07g0864 Cec-Chr7:21187244 Cec07g0865 Cec-Chr7:21284517 1.70E-12 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29905 PF03106 WRKY 7.30E-25 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g0864 - - - 0.0