Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0963 | ATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCAGAAGAGGTTCCAATTATCATCTTCCTACTACTACTACTAGTATCACCACCAGCGGCGGCGAAATAATTCATCCCAACGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACGTGGGAAGAACAACAGCAACCGCAGGAACAAGGGGGAGAAGGATTTGTTTACTCGGGCGATGAATCGCCGGCTAGATCGTCGTTGGTGATGGTGAGATCGGGAAGAGGCGGCGGTGGAGGGCATGTAACGAGCTGCCAAGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACTCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCCAACTCCGTTGCCTCGCCTCTAACCCCAAACGCCCTAAAGACAACCCCGCTGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTAAACTCTGCGGCGGTGTTTCGGTGCGTTCGAATGACAACGTTGGACGAAACCAACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACAACTACAACAACAGCCACCCACCTCCGCCTCCCCTGACGCCTCCGCCCTCCTCATCACCACCGCTGAATCCGCCGCATTGCTCGATCCACCTCCGCCGTACCCCACTCCTCTTTCCACCTACATCGCCACCGGTACGCAATTTTTTTTTCCCCCAACATCTTAA | 819 | 52.14 | MAGFFPLGGAGSSRRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRQLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSAAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPPYPTPLSTYIATGTQFFFPPTS | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 23622224 | 23623149 | - | CePI673135_07g009630.1 | Cec07g0963 | 207742 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0963 | 272 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 1 | 266 | IPR007818 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0045893(PANTHER) | |
Cec07g0963 | 272 | NCBIfam | LRP1 C-terminal domain | 169 | 216 | IPR006511 | - | |
Cec07g0963 | 272 | MobiDBLite | consensus disorder prediction | 16 | 34 | - | - | |
Cec07g0963 | 272 | NCBIfam | putative zinc finger domain, LRP1 type | 97 | 139 | IPR006510 | - | |
Cec07g0963 | 272 | MobiDBLite | consensus disorder prediction | 55 | 74 | - | - | |
Cec07g0963 | 272 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Cec07g0963 | 272 | Pfam | Domain of unknown function (DUF702) | 96 | 217 | - | - | |
Cec07g0963 | 272 | MobiDBLite | consensus disorder prediction | 145 | 166 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2046 | Cec-Chr5:32372190 | Cec07g0963 | Cec-Chr7:23622224 | 3.90E-44 | dispersed | |
Cec05g2916 | Cec-Chr5:39310674 | Cec07g0963 | Cec-Chr7:23622224 | 3.80E-28 | dispersed | |
Cec07g0963 | Cec-Chr7:23622224 | Cec09g1445 | Cec-Chr9:21478132 | 3.20E-42 | dispersed | |
Cec04g1699 | Cec-Chr4:36110252 | Cec07g0963 | Cec-Chr7:23622224 | 1.10E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29914 | PF05142 | DUF702 | 7.30E-51 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0963 | K27807 | - | csv:101216097 | 373.244 |