Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g0994 | ATGCCATCGGACTTAGAAAATTCCTCCAACGCTTCTGGCGAAGTCAGTATCTCCTCCACTGGCAATCAGCCTCCGCCGCCCAAATCCGCCGTGAAAAAAAAGCGTAATTTACCTGGAATGCCAGATCCGGATGCAGAGGTAATTGCTCTGTCTCCGAAGACCCTTTTGGCTACAAATCGATTTGTGTGTGAAATTTGCAACAAAGGGTTTCAAAGAGATCAGAATCTGCAACTTCACCGGCGAGGTCACAATCTTCCATGGAAACTCCGGCAACGAACTAGCAAAGAGGTGAAAAAGAAAGTCTATGTCTGCCCTGAGCCGTCGTGCGTCCACCACCATCCGTCGAGAGCTCTCGGCGATCTGACCGGAATAAAGAAGCACTTCTGCCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGAAAAGTGCTCTAAAAAATATGCAGTCAAGTCCGATTGGAAGGCTCATTCTAAGATTTGTGGCACCAGAGAGTACAAATGCGACTGTGAGACTGTGTTTTCGAGAAGAGATAGTTTCATCACTCACAGAGCCTTCTGTGATGCGTTGACGAAGGAAGCTGCTGGAAGTTTGTCTCCGGCGGCGGCGGAGAATCCTAATTTGGAGTCCGATCCTCATGTTCAGCCGTCGGGTAGTTCGTCTCCGCCGCCTTCTGCCCCTCCTCTTTCCGCCGCGACCGGTGCCGCGCCAATAGCTCCTCCTCCATCCACTGACGCGATGTCATCAATCGCGTCCATTGAGAATAAAGCCTCACCGGAAAATCCTCCGCCGCAGCTAGGAGAGGCACCGGGCAGAACTACCCTAACTGGAAACTCCGGCAGCAGCAGCAACGCTAGCGTATTGGCTAGCTTGTTTGCTTCCTCCGCCGCATCGCTGAGCTTACAGCCGCCGCAGCCACCTGCATTTTGCGACTTATTACGAGCCATGGCGCGGCCTGATCGGGCGGCTGAAATTGCACCGCCGTTGGTTTTTGAACCTCTTTCGCTGTGCCTATCGACCGACACCGAATCGTCACTTTTTCGAGCTGGAATCCAAGAGTGCCGCCCATATGTGCCACCGACACCGCCGTCCATGTCCGCCACCGGACTCCTACAGAAGGCCGCTCAAATGGGCGCTGCAGCGGCGGGCGCATCAGTGTTTCGTGGACTTGGTTTATCGTCTTCCTCTTCTTCTGCACAACAGGGGAGTTTATAA | 1209 | 53.6 | MPSDLENSSNASGEVSISSTGNQPPPPKSAVKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVKSDWKAHSKICGTREYKCDCETVFSRRDSFITHRAFCDALTKEAAGSLSPAAAENPNLESDPHVQPSGSSSPPPSAPPLSAATGAAPIAPPPSTDAMSSIASIENKASPENPPPQLGEAPGRTTLTGNSGSSSNASVLASLFASSAASLSLQPPQPPAFCDLLRAMARPDRAAEIAPPLVFEPLSLCLSTDTESSLFRAGIQECRPYVPPTPPSMSATGLLQKAAQMGAAAAGASVFRGLGLSSSSSSAQQGSL | 402 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 24312143 | 24315060 | - | CePI673135_07g009940.1 | Cec07g0994 | 207773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g0994 | 402 | Gene3D | Classic Zinc Finger | 130 | 193 | - | - | |
Cec07g0994 | 402 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec07g0994 | 402 | Gene3D | Classic Zinc Finger | 41 | 108 | - | - | |
Cec07g0994 | 402 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 163 | 197 | - | - | |
Cec07g0994 | 402 | MobiDBLite | consensus disorder prediction | 196 | 279 | - | - | |
Cec07g0994 | 402 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 115 | 194 | - | - | |
Cec07g0994 | 402 | FunFam | protein indeterminate-domain 12-like | 40 | 108 | - | - | |
Cec07g0994 | 402 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 136 | 160 | - | - | |
Cec07g0994 | 402 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 61 | 83 | IPR013087 | - | |
Cec07g0994 | 402 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 98 | 132 | - | - | |
Cec07g0994 | 402 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 63 | 83 | IPR013087 | - | |
Cec07g0994 | 402 | SMART | c2h2final6 | 61 | 83 | IPR013087 | - | |
Cec07g0994 | 402 | SMART | c2h2final6 | 137 | 157 | IPR013087 | - | |
Cec07g0994 | 402 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Cec07g0994 | 402 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 157 | IPR036236 | - | |
Cec07g0994 | 402 | Pfam | Zinc finger, C2H2 type | 61 | 83 | IPR013087 | - | |
Cec07g0994 | 402 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 19 | 391 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec07g0994 | 402 | MobiDBLite | consensus disorder prediction | 243 | 257 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1826 | Cec-Chr2:36101299 | Cec07g0994 | Cec-Chr7:24312143 | 1.70E-26 | dispersed | |
Cec07g0994 | Cec-Chr7:24312143 | Cec08g1569 | Cec-Chr8:27281530 | 4.00E-89 | dispersed | |
Cec07g0994 | Cec-Chr7:24312143 | Cec04g1633 | Cec-Chr4:35643273 | 2.00E-125 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29920 | PF00096 | zf-C2H2 | 0.0039 | CL0361 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g0994 | K25869 | - | csv:101215476 | 606.29 |