Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1003 | ATGAGTTCAACGTATGATGAGAGTGCTCTGGGGCCGGACTCTCCATCCCAGCCCGCCGCTCCACCGCCAGATCCATCGTCTTCGTCGTCACCTCCACCGTCATTGTCACCACCTTCTCCCGATCACAACTCCGATTTCTCTCCTCCACCATCACCAGAAAACGATGATGGCTCATCCGATAAGTCCTCACCACGCCCATCAGATTCTCCATCTCCAAAGTCGCCGTCGAATGGTTCTTCCGATGATAACAAATCCCCTCCAGCTCCAAAAGAGGGTAACCAGCGATCACCGCCGCACGTTTCTCATTCTCCTCCATCCCGATCTTCGTCACCGGCAGATGCATTGCCTCCACCAGAAGGAAAGGCATCACCGAAATCGTCCGGAGCAAGACAACAAGCAACGCCGTCGTCCGAGGGCGATTCATCACCGTCGGAGATCAACCCAGGGGTTATAATTGGGGTGGCGGTGGGGGTGGGCGTTTTCATAATTGTTCTCATATCAATAATTGCAGTGTGTTCAAAGAAGAAGAAGAGAAAGGGAGATCCTATGCAATATTATGGAGATCATGGTCATGGACCTAAAGGTGGTGACTATTACAACAGTTCACAGCAACAAAACTGGCACAACGGCATGCACGGTCCAGGGACGGATCAATTTGGGAGGCCACCGGTATCGGGGTCTCCAGCCGGGAACGGGTGGCCAATGAGTGGCGACAACATGACGACAGGCAGCACCTACACGGGGCCTCCTCTTCCTCCGCCATCACCATCGATCGCCTTTGGGTTCAACAAGAGCACGTTCACCTACGACGAACTCGCAGCAGCAACAGGTGGGTTCGCACACGGGAACCTGCTCGGGCAGGGCGGGTTCGGGTATGTGCACAAGGGGGTGCTGCCCAATGGGAAGGAGGTGGCCGTTAAGAGCCTGAAGGTGGGCAGCGGGCAGGGTGAGAGGGAGTTCATGGCTGAAGTTGAGATTATTAGCAGAGTCCATCATCGGCATTTGGTTTCCTTGGTTGGCTTTTGCATTGCCGGTGGACAAAGAATGTTGGTCTATGAGTTTGTTCCAAACAACACCTTGGAACATCACCTCCATGGCAAAGGTCTCCCAGTAATGGATTGGCCAACCAGACTTCGTATTGCAATAGGTTCTGCCAAGGGTCTTGCTTATCTCCATGAAGATTGTCATCCAAAGATTATTCATCGAGATATCAAGTCAGCTAATATTCTGATCGATGCCAATTTTGAAGCAATGGTGGCTGATTTTGGATTAGCTAAGCTATCCTCAGATAATCATACACATGTCTCCACTAGAGTCATGGGTACATTCGGGTATTTGGCACCAGAATATGCATCAAGTGGAAAGCTGACAGAAAAATCTGATGTATTCTCGTTCGGTGTAATGTTGTTGGAACTCATCACAGGAAAACGACCCGTAGATCCTACTCAAGCCATGGAGGATAGCTTAGTTGATTGGGCTCGACCACTAATGAGCCGGGCATTGATGGAAGGCATCTACGAGGAGTTGGTGGATGTGCGTTTAGAGAATGAGTTCAACACACAAGAAATGGCTCGCATGGTGGCTTGTGCTGCAGCCTCCATTCGCCACTCGGCTAGAAAACGCCCCAAAATGAGCCAGGTGGTTCGAGCCTTAGAAGGAGATGTTTCCTTGGACGACTTAAACGAAGGCATAAGACCTGGGCAAAGCTCCATCTATAGCGCCGCTAGCTCCGATTACGACTCCAGCGCCTACCATGCCGACATGTCGAAATTCAGGAAGATCGCTTTGTCGGACGACAGTAGTGAACTCGCCACTTCCAGCAACGACTCCAGAGAGATGAACCATCCCGGCCCGGGGACCCAAAGGCCGCTCTTTTGA | 1878 | 51.6 | MSSTYDESALGPDSPSQPAAPPPDPSSSSSPPPSLSPPSPDHNSDFSPPPSPENDDGSSDKSSPRPSDSPSPKSPSNGSSDDNKSPPAPKEGNQRSPPHVSHSPPSRSSSPADALPPPEGKASPKSSGARQQATPSSEGDSSPSEINPGVIIGVAVGVGVFIIVLISIIAVCSKKKKRKGDPMQYYGDHGHGPKGGDYYNSSQQQNWHNGMHGPGTDQFGRPPVSGSPAGNGWPMSGDNMTTGSTYTGPPLPPPSPSIAFGFNKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHGKGLPVMDWPTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSSDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTQAMEDSLVDWARPLMSRALMEGIYEELVDVRLENEFNTQEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYSAASSDYDSSAYHADMSKFRKIALSDDSSELATSSNDSREMNHPGPGTQRPLF | 625 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 24464448 | 24471452 | + | CePI673135_07g010030.1 | Cec07g1003 | 207782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1003 | 625 | Gene3D | Phosphorylase Kinase; domain 1 | 255 | 354 | - | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 125 | 144 | - | - | |
Cec07g1003 | 625 | CDD | STKc_IRAK | 285 | 553 | - | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 15 | 47 | - | - | |
Cec07g1003 | 625 | SUPERFAMILY | Protein kinase-like (PK-like) | 253 | 551 | IPR011009 | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 48 | 109 | - | - | |
Cec07g1003 | 625 | ProSiteProfiles | Protein kinase domain profile. | 279 | 557 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec07g1003 | 625 | FunFam | proline-rich receptor-like protein kinase PERK1 | 257 | 354 | - | - | |
Cec07g1003 | 625 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 122 | 594 | IPR047117 | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 1 | 146 | - | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 232 | 246 | - | - | |
Cec07g1003 | 625 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 355 | 562 | - | - | |
Cec07g1003 | 625 | SMART | serkin_6 | 279 | 540 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec07g1003 | 625 | ProSitePatterns | Protein kinases ATP-binding region signature. | 285 | 307 | IPR017441 | GO:0005524(InterPro) | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 210 | 252 | - | - | |
Cec07g1003 | 625 | Gene3D | Transferase(Phosphotransferase) domain 1 | 355 | 562 | - | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 599 | 625 | - | - | |
Cec07g1003 | 625 | MobiDBLite | consensus disorder prediction | 599 | 615 | - | - | |
Cec07g1003 | 625 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 399 | 411 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec07g1003 | 625 | Pfam | Protein tyrosine and serine/threonine kinase | 283 | 550 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1003 | Cec-Chr7:24464448 | Cec11g0254 | Cec-Chr11:2691823 | 1.30E-155 | dispersed | |
Cec07g1003 | Cec-Chr7:24464448 | Cec11g0464 | Cec-Chr11:4945963 | 1.00E-163 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72133 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-46 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1003 | - | - | - | 0.0 |