Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1011 ATGGCGTATATGTGCGCAGATAGTGGCAATCTAATGGCAATTGCCCAACAACTCATCAACCAAAAACAACACCAACACCAAGACCAACATCAACATCTTTCTCCACTTACCACTCCTTTTTCTCTTCTTCCTTGCACTAATAACAATCCTTCCCCTTCCCCAACTATGGCTTCTTCTTCTTCTTCTCCTAATTTCTCCTTCGGGATTTCTGCTGCTGCTTTCTCTGATCCTTTTCAGGTCGCCGGACCCCCCGATTCTGCCGACCCATCTTTTCATTTCTCTAATTTGGACCACCCTTCTGCTGCCTTTAGGTTTTTCCCTAATTTTGGCGATGCCACCGGTGGAGAGTTTGAATCTGATGAGTGGATGGATAGTTTAGTAGGCGGTGGAGATTCCACGTATAGCTCAAATTTGCCGTCTGCTTGCGATGCTTATGGTGAGTTTGGTCTCTATGGTACAGATCCCTTTAATGGCTCTCCCAGAAGACTCACTGTCGCTTGCTCTCCGCCATCTGAGTTGATCAACCGAGTTGTTCTCCCGGAAAGTTCATACAAAATGAATAGTGTTCCGCCACCATGGCCATCATCTCCACAGTTGGTTAAGGATGATGGAGCAACCAATCCACCGGTGGAGAGGTCAGTGAAGAATGATGACGTTGTTGAAGGATCGTCGAGTGCGGAAGAGGTTGAGTCATCGTCGCCGATTCTGAAAGTCTTGCTTGATTGTGCGCGGCTCTGCGATTCTGAACCCAACCGAGCAGCGAAAGGTCTTAATCGGATTAGTAAATCGTTACGAGAAGATGGAGATCCGGCTGAACGAGTGGCGTTTTACTTCGGCGAGGCTCTTCGGAAGAGATTATCCTTGACGGTGATGAAGAATTGCTTGGATACAACTGAGAGTGATGCTAATTCTGAAGATTTCTTGCTCTCTTACAAAGCTCTGAACGACGCCTGTCCTTACTCCAAGTTCGCGCATCTAACGGCCAACCAAGCAATTCTGGAAGCTACAGAGAGAGCAAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAAGGCGTTCAATGGGCGGCGCTTCTGCAGGCTTTGGCCACGCGAGCCACTGGAAAGCCTATCAGAGTTCGTATCTCCGGAATACCAGCGCCGTCGCTTGGAGATTCACCGGCAGCGTCCCTATACGCCACTGGCAATAGACTCTCCGAGTTCGCAAAGCTTCTAGAACTGAATTTCGAGTTCGAACCGATTCTATCGCCGATTGAGAACCTGAACGAATCGAGCTTTAGCGTTCAATCAGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTATAATCTCCTCGACGAGGATCCAGCTGGAGTTCATAATGCTCTTCGATTAGCAAAATCGTTGAGCCCTCAAATAGTGACTCTCGGCGAGTACGAGGCGGGTTTGAACCGGATCGGATTCTACAATCGCTTCAAGAACGCATTGAAATTCTACTCCGCCATTTTCGAATCGCTAGAGCCGAATTTGCCTCGAGACTCGCCAGAAAGACTCCAGTTAGAAAAACTGTTACTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGAAGAAGATTCAAGAAACAAAAGAAGAGTGCGCATGGAAGACAAAGATCAATGGAAGAATTTGATGGAAAGCGCCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGGGAAAATACTTTTATGGAACTACAATTACAGTTCTCTCTACACTCTGATCGAATCGGCGCCGGAGTTTCTGTCGCTGGCATGGAACGAAGTTCCTCTCTTAACTGTATCTTCCTGGCGTTGA 1827 47.84 MAYMCADSGNLMAIAQQLINQKQHQHQDQHQHLSPLTTPFSLLPCTNNNPSPSPTMASSSSSPNFSFGISAAAFSDPFQVAGPPDSADPSFHFSNLDHPSAAFRFFPNFGDATGGEFESDEWMDSLVGGGDSTYSSNLPSACDAYGEFGLYGTDPFNGSPRRLTVACSPPSELINRVVLPESSYKMNSVPPPWPSSPQLVKDDGATNPPVERSVKNDDVVEGSSSAEEVESSSPILKVLLDCARLCDSEPNRAAKGLNRISKSLREDGDPAERVAFYFGEALRKRLSLTVMKNCLDTTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRATGKPIRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILSPIENLNESSFSVQSDEVLAVNFMLQLYNLLDEDPAGVHNALRLAKSLSPQIVTLGEYEAGLNRIGFYNRFKNALKFYSAIFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGTEEDSRNKRRVRMEDKDQWKNLMESAGFEPVALSHYAISQGKILLWNYNYSSLYTLIESAPEFLSLAWNEVPLLTVSSWR 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24661846 24663672 + CePI673135_07g010110.1 Cec07g1011 207790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1011 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 607 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec07g1011 608 MobiDBLite consensus disorder prediction 185 228 - -
Cec07g1011 608 Pfam GRAS domain family 236 608 IPR005202 -
Cec07g1011 608 MobiDBLite consensus disorder prediction 22 60 - -
Cec07g1011 608 ProSiteProfiles GRAS family profile. 226 608 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1642 Cec-Chr4:35705724 Cec07g1011 Cec-Chr7:24661846 4.70E-162 dispersed
Cec07g1011 Cec-Chr7:24661846 Cec11g0748 Cec-Chr11:8541739 9.70E-55 dispersed
Cec07g1011 Cec-Chr7:24661846 Cec10g2124 Cec-Chr10:35838549 6.50E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29923 PF03514 GRAS 5.50E-108 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1011 - - - 0.0