Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1022 ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCAAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCACCGAACAAATTATTGGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCATTGGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGAGTTTCAATATGAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATAGCGGCTCATCTTCAACAGACCTCTGGTTGGTGA 675 47.41 MSGHKRNFTTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQKSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAIAAHLQQTSGW 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24883369 24884043 - CePI673135_07g010220.1 Cec07g1022 207801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1022 224 FunFam Nuclear transcription factor Y subunit B-3 25 148 - -
Cec07g1022 224 MobiDBLite consensus disorder prediction 126 145 - -
Cec07g1022 224 ProSitePatterns NF-YB/HAP3 subunit signature. 67 83 IPR003956 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1022 224 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 170 IPR027113 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0001228(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016602(PANTHER)|GO:0016602(InterPro)
Cec07g1022 224 Gene3D Histone, subunit A 23 156 IPR009072 GO:0046982(InterPro)
Cec07g1022 224 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 100 IPR003958 -
Cec07g1022 224 MobiDBLite consensus disorder prediction 1 32 - -
Cec07g1022 224 SUPERFAMILY Histone-fold 33 135 IPR009072 GO:0046982(InterPro)
Cec07g1022 224 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Cec07g1022 224 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Cec07g1022 224 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
Cec07g1022 224 Coils Coil 112 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0951 Cec-Chr2:13010460 Cec07g1022 Cec-Chr7:24883369 1.60E-46 dispersed
Cec07g1022 Cec-Chr7:24883369 Cec10g0423 Cec-Chr10:5109684 4.50E-42 dispersed
Cec07g1022 Cec-Chr7:24883369 Cec02g1461 Cec-Chr2:32002614 3.30E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29924 PF00808 CBFD_NFYB_HMF 6.70E-27 CL0012 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1022 K08065 - csv:101214273 404.831