Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1108 ATGAAGATTCAGTGTAACGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGACGAGAAGATTCATGCAGCCAACAAGCTCGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGGCTCTTCCTCTCAGATGCCTAAATGCGATATCTGCCAGGAAGCTAGTGGCTATATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTACTTACTGGTGTGAAAGTGGCGCTCGAGCCAACTGACCCCGTTGCTTGTTCTTCCATGGATAAGTCACATTCTCGAGAGAAGTTCACTGAGACTAAAGTTAGACCACTGTCTGAAAGGGAATTCTCGATGCCTTCTCCTGATGAACTCAGTAGAAGCTTGTCTGTACTAGGTGGATCTGAGGACTTTATGGCAAATAGAACATTGCTTACCGGAGGCGGAGATTCTGTTTCTGGTGGTTTTTCACAGTGGCAAATGGATGAACTTATTAATCTGACTGGATTCAATCAGAACTATGGGTATATGGATAACGGATCATCCAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCATCACCAGTTTTGAGAGCTGCTGACATCGAACTGGACGATGACACTGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACAGTGCCTCAGATTCCCTCTCCACCCACAGCGTCAGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGCGCTGTTTTTGTTCCTGACATCTCCTGTTCTTCAGAAAACGTTCAACATTGCTCACATAATGGTACCTTCTCAAAACGAAGAAGACAGTTCTAG 897 46.6 MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVACSSMDKSHSREKFTETKVRPLSEREFSMPSPDELSRSLSVLGGSEDFMANRTLLTGGGDSVSGGFSQWQMDELINLTGFNQNYGYMDNGSSKADSGKLGDSDSSPVLRAADIELDDDTECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSENVQHCSHNGTFSKRRRQF 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26281393 26283596 - CePI673135_07g011080.1 Cec07g1108 207887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1108 298 MobiDBLite consensus disorder prediction 125 147 - -
Cec07g1108 298 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 279 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Cec07g1108 298 CDD Bbox1_BBX-like 56 99 IPR049808 -
Cec07g1108 298 FunFam B-box zinc finger protein 22 1 93 - -
Cec07g1108 298 CDD Bbox1_BBX-like 5 47 IPR049808 -
Cec07g1108 298 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270(InterPro)
Cec07g1108 298 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Cec07g1108 298 Pfam B-box zinc finger 3 47 IPR000315 GO:0008270(InterPro)
Cec07g1108 298 Pfam B-box zinc finger 53 96 IPR000315 GO:0008270(InterPro)
Cec07g1108 298 Gene3D Classic Zinc Finger 1 92 - -
Cec07g1108 298 SMART bboxneu5 4 47 IPR000315 GO:0008270(InterPro)
Cec07g1108 298 SMART bboxneu5 52 99 IPR000315 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1710 Cec-Chr4:36182194 Cec07g1108 Cec-Chr7:26281393 6.30E-20 dispersed
Cec07g0908 Cec-Chr7:22562950 Cec07g1108 Cec-Chr7:26281393 4.80E-21 dispersed
Cec07g1108 Cec-Chr7:26281393 Cec09g1443 Cec-Chr9:21344998 7.20E-27 dispersed
Cec07g1108 Cec-Chr7:26281393 Cec08g1502 Cec-Chr8:26751415 5.30E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29933 PF00643 zf-B_box 3.60E-07 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1108 - - - 0.0