Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1113 ATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGAGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCCGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAACATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCAGCAGCTGCAAGCCCGTATGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCTTCATATGTTGGTAATCCGAATGCTGACGGAAGTTCGCTTATCCCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCCTCTAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCGGTAACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCCCAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCAATCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCGACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGTATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCGGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTCATCTCTGATGAGTTCGCCTTTGGAAGCAATGCATCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAACTCACTCTTGGAAACTCAAGGACCAGGTAA 978 49.49 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNASGIVKPWEGERIHEECGSDDLELTLGNSRTR 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26331372 26334138 - CePI673135_07g011130.1 Cec07g1113 207892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1113 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cec07g1113 325 MobiDBLite consensus disorder prediction 88 122 - -
Cec07g1113 325 MobiDBLite consensus disorder prediction 91 122 - -
Cec07g1113 325 MobiDBLite consensus disorder prediction 1 20 - -
Cec07g1113 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
Cec07g1113 325 MobiDBLite consensus disorder prediction 193 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0673 Cec-Chr3:7252565 Cec07g1113 Cec-Chr7:26331372 1.00E-122 dispersed
Cec07g1113 Cec-Chr7:26331372 Cec08g1575 Cec-Chr8:27316678 2.90E-45 dispersed
Cec07g1113 Cec-Chr7:26331372 Cec04g1622 Cec-Chr4:35562619 4.50E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29934 PF05687 BES1_N 1.30E-65 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1113 - - - 0.0