Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1124 ATGTCTCTTCGCAGATCCTTTCTCTCTCGGAAGTTTTCTTCCAAGTCCTCCTCTAGAGATCCCAATGCTCTTGGGGGAATTCTTCCGTTGTCCGCCTCGGACTTCGATCATGCCTCCGCTCTGCCCGGAGGGAGTGGCGGCGATCGGATGCAGGCTGAATCCGCTTGGTCTTCCATGCTACCCGAGCTTCTTCGCGAGATCATTCAGCGGGTTGAGGCTTCAGAAGACGCTTGGCCTAACCGCCACAGCGTTGTTTCCTGTGCTTGTGTCTGTAAGCGTTGGCGGGATATTACTAAAGAGATCGTCAGGGCCACACCTCATTCCGGGAAAATTACTTTCCCTTCTTGCCTCAAACAGCCTGGACCAAGTGATCTTCCACATCAGTGTCTTATAAAAAGGAACAAGAAGACTTCAACATTTTTCCTTTATCTTGCCCTTACACCATCATTTACAGATAAGGGAAAATTCCTCTTAGCTGCACGGAGATATAGGCATGGAGCTCATACTGAGTATATAATATCTCTTGATGCTGAAGACTTATCCCAAGGAAGCAATGCCTATGTGGGGAAGTTAAGCTCCGATTTTCTTGGCACCAACTTTACCATTTATGACAGTCAACCACCACATAACGGTGCAAAGCCATCAAGCAGTAAATCAAGCCGCCGCTTTGCAAGCAAGCAAATTAGCCCACAAGTGTCTGCAGGTAACTTTGAGGTTGGGCAAGTCTCTTACAAATTTAATCTTTTGAAATCGAGAGGCCCAAGGCGAATGATATGCTCTCTAAAGTGCCCAGTATCAGAAGACACTGGAACCAGCAAACCTTGTGAGAACTCGAAGATGAAGAAATCCGAATCTCTTTCTTCCTCATCTGGGTTGACAATCTTAAGAAACAAGGCTCCTAGGTGGCATGAGCACCTGCAATGCTGGTGCTTGAATTTTCATGGTCGGGTTACAGTAGCATCTGTTAAAAACTTTCAACTAGTCGCTACTATTGACCATAGCCAGCCAGGAGGTAAAGGGGATGAAGAAACAGTTCTACTACAGTTTGGAAAGGTAGGCGACGATACGTTTACTATGGATTATAGGCAGCCATTATCAGCTTTCCAGGCTTTCGCCATTTGCCTTACGAGCTTTGGCACGAAGCTGGCCCTTCTTTTTTGGGCCGAAAGTGAAAAAGGCCGAGGGCCCATTAACGGAAAACTCCCCGATCGGCAGAAGCTCCGAGGGATCTTCTCTCTTCTGCAACGAGTTCGTTTTCGGGAAGCCGAAGTGGAAACAACGATGGAAGCAAAAAGGCGATCGAAGATGAGGATCGCCATAATCCACCCAGACCTTGGTATAGGGGGAGCTGAGAGATTGATTGTGGATGCTGCTGTTGAACTTGCTTCGCATGGACATGATGTCCATATTTTTACATCACACCACGACAAAAATCGGTGCTTTGAGGAGACGCTTGCTGGAACGTTTCCAGTTACTGTGTATGGTGATTTCCTACCTCGCCACATCTTTTACCGCCTCCATGCAGTTTGTGCATATCTACGGTGTATTTTTGTCACTCTTTGCATGCTGTTCATGTGGCCATCGTTTGATGTCATACTAGCAGATCAGGTTTCTGTTGTTGTTCCAATACTTAAGCTGAAAAGGTCATCAAAGGTTGTATTTTATTGTCATTTTCCGGATCTCTTACTGGCCAAGCACACGACCATTTTGAGGAGGCTGTACAGAAAACCCATAGACTTCATTGAAGAATTGACAACCGGCATGGCAGATTTGATATTGGTTAATAGCAAATTTACGGCGTCCACTTTTGCCAAGACATTCAAACATCTTAATGCACAAGGAATTCGACCTGCTGTTCTTTATCCAGCTGTCAATGTAGATCAGTTTGATGAGCCCCATTCTTCTAAGTTGAGTTTTCTTTCTATCAACCGTTTTGAAAGGAAGAAAAACATTGAATTAGCTATCTCAGCCTTTGCTAAGCTTGGCACACTTGAAGGAGGCACTCTTCAAGATTACAATGTAGCTGATGTTTCCTTGGTCATTGCTGGTGGCTTTGATAAACGGCTAAGAGAGAATGTTGAATACTTGGAGGAGCTCAGGAATTTAGCTGAACGAGAAGGTGTATCCGAACGTGTTACCTTCATCACATCCTGCTCAACACTTGAAAGAAACGCCCTCCTTTCCCAATGTCTGTGTGTCCTCTACACGCCAAAGGACGAACACTTCGGCATTGTTCCTTTGGAAGCCATGGCAGCTTACAAACCTGTTATTGCATGCAACAGTGGGGGTCCAGTCGAGACCATAAAACATGGCGCTACCGGATTTCTTTGTTCGCCTAATCCTCGAGAGTTCTCTCTGGCAATGGCGAAACTCATTCAGGATCCCGCCATGGCAGCAAGAATGGGTTGGGAAGCCCGACAACACATCATCGAATCTTTCTCTACAAAGATATTTGGTCAGCAACTGAATCAATACCTTGTCGATGTCGCTCGACTTAAGAGAGACTGA 2508 45.81 MSLRRSFLSRKFSSKSSSRDPNALGGILPLSASDFDHASALPGGSGGDRMQAESAWSSMLPELLREIIQRVEASEDAWPNRHSVVSCACVCKRWRDITKEIVRATPHSGKITFPSCLKQPGPSDLPHQCLIKRNKKTSTFFLYLALTPSFTDKGKFLLAARRYRHGAHTEYIISLDAEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPCENSKMKKSESLSSSSGLTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATIDHSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLALLFWAESEKGRGPINGKLPDRQKLRGIFSLLQRVRFREAEVETTMEAKRRSKMRIAIIHPDLGIGGAERLIVDAAVELASHGHDVHIFTSHHDKNRCFEETLAGTFPVTVYGDFLPRHIFYRLHAVCAYLRCIFVTLCMLFMWPSFDVILADQVSVVVPILKLKRSSKVVFYCHFPDLLLAKHTTILRRLYRKPIDFIEELTTGMADLILVNSKFTASTFAKTFKHLNAQGIRPAVLYPAVNVDQFDEPHSSKLSFLSINRFERKKNIELAISAFAKLGTLEGGTLQDYNVADVSLVIAGGFDKRLRENVEYLEELRNLAEREGVSERVTFITSCSTLERNALLSQCLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVETIKHGATGFLCSPNPREFSLAMAKLIQDPAMAARMGWEARQHIIESFSTKIFGQQLNQYLVDVARLKRD 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26454673 26463784 - CePI673135_07g011240.1 Cec07g1124 207903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1124 835 ProSitePatterns Tub family signature 1. 313 326 IPR018066 -
Cec07g1124 835 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 436 826 - -
Cec07g1124 835 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 431 831 IPR027054 GO:0000033(PANTHER)|GO:0004378(InterPro)|GO:0006486(InterPro)|GO:0006490(PANTHER)|GO:0012505(PANTHER)
Cec07g1124 835 Pfam Glycosyl transferases group 1 635 807 IPR001296 GO:0016757(InterPro)
Cec07g1124 835 Pfam F-box domain 56 99 IPR001810 GO:0005515(InterPro)
Cec07g1124 835 Coils Coil 686 706 - -
Cec07g1124 835 CDD F-box_AtTLP-like 56 100 - -
Cec07g1124 835 CDD GT4_ALG2-like 436 822 - -
Cec07g1124 835 SUPERFAMILY F-box domain 52 99 IPR036047 GO:0005515(InterPro)
Cec07g1124 835 Gene3D Glycogen Phosphorylase B; 633 829 - -
Cec07g1124 835 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 632 814 - -
Cec07g1124 835 Gene3D Tubby Protein; Chain A 115 379 IPR025659 -
Cec07g1124 835 SUPERFAMILY Tubby C-terminal domain-like 107 384 IPR025659 -
Cec07g1124 835 Gene3D Glycogen Phosphorylase B; 432 632 - -
Cec07g1124 835 Pfam Tub family 117 380 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 187 211 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 363 385 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 342 361 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 236 263 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 313 329 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 295 312 IPR000007 -
Cec07g1124 835 PRINTS Tubby superfamily signature 171 187 IPR000007 -
Cec07g1124 835 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 433 631 - -
Cec07g1124 835 Pfam Glycosyltransferase Family 4 447 627 IPR028098 -
Cec07g1124 835 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1124 Cec-Chr7:26454673 Cec08g0729 Cec-Chr8:19023887 9.10E-96 dispersed
Cec07g1124 Cec-Chr7:26454673 Cec05g0683 Cec-Chr5:5601650 6.10E-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29935 PF01167 Tub 3.00E-102 CL0395 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1124 K03843 - csv:101211733 772.311