Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1131 ATGCCGCAAGATCATCCAAAGAAGGATGCCAAAGAAATAAACTTTTTTACTGAATATGGGGATGCTAACAGATATAAGATTCTTGAAGTTGTTGGAAGGGGAAGTTATGGAGTTGTTTGTTCTGCTATTGACATGCAAACTGGGGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTGATCACGCATCTGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGACATCAAGCGTATTATATTACCACCTTCTAAAAAGGAATTTAGGGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACGCGTGAACATCATCAATTTTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTGTATCATAGAGATCTGAAGCCGAAGAATATATTGGCAAATGCGAATTGCAAGCTTAAAATTTGTGATTTTGGGCTTGCAAGAGTTGCTTTCAGTGACACCCCAACTACTGTATTTTGGACAGACTATGTTGCTACTCGATGGTACAGAGCTCCAGAGTTGTGTGGATCATTCTGTTCCAAGTATACTCCTGCGATAGATATTTGGAGTGTCGGCTGCATATTTGCTGAGGTTTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGCGTTGCCCATCAATTGGACTTGATTACTGATCTTCTTGGGACTCCCTCATTGGAAACCATTGCAGGAGTTCGGAATGAAAAGGCCAGGAAATATTTGACAGAAATGAGAAAGAAATCTGCAGTGCCATTTTCACAAAGATTTCCCAATGCAGATCCTACAGCCATCCGCTTATTGCAAAGACTATTAGCATTTGATCCAAAGGATCGACCATCGGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGAAAGAGAGCCTTCTTGTCAACCAATCTCAAGAGCGGAATTTGAGTTTGAGAGACGGAAATTAACAAGGGATGATGTGAGGGAATTGTTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGAAGATTACTTGAATGGAACTGAGACTACAAAGCTCCTTTATCCTAGCGTTACAGGTCATTTTAAAAGCCAATTCACCTTCCACAAGGAGAATAACGGTAAAAGCGCACCTGTTTTGCCTCTAGAACGGAAACACTTCTCCCTGCCACGGTCCACTGTTTGCACAAATTTGGCTTCACCTGATCGTGAACCCGTTCGACGAAATCCCAAAGTTTTTAATAATAGTATGGGATTACCTGATAGAAAATTTGTGAATCCATCAAAGGCTCATCCTCCACCTAAAGTGCCTACTGGACGAGTTGCTGGGCCTGTCCTCCCTTATGAGCACAGAAACATAAAAGATGTTTATTCGAACCTAACGTCACAAATTAGAAGTTTGGATTTCTGA 1479 40.3 MPQDHPKKDAKEINFFTEYGDANRYKILEVVGRGSYGVVCSAIDMQTGEKVAIKRIHDIFDHASDAIRILREVKLLRLLRHPDIVDIKRIILPPSKKEFRDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSVGCIFAEVLMGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKARKYLTEMRKKSAVPFSQRFPNADPTAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRAEFEFERRKLTRDDVRELLYREILEYHPQIREDYLNGTETTKLLYPSVTGHFKSQFTFHKENNGKSAPVLPLERKHFSLPRSTVCTNLASPDREPVRRNPKVFNNSMGLPDRKFVNPSKAHPPPKVPTGRVAGPVLPYEHRNIKDVYSNLTSQIRSLDF 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26556051 26559901 + CePI673135_07g011310.1 Cec07g1131 207910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1131 492 FunFam Mitogen-activated protein kinase 111 339 - -
Cec07g1131 492 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1131 492 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1131 492 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1131 492 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cec07g1131 492 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524(InterPro)
Cec07g1131 492 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1131 492 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec07g1131 492 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Cec07g1131 492 MobiDBLite consensus disorder prediction 423 464 - -
Cec07g1131 492 FunFam Mitogen-activated protein kinase 14 119 - -
Cec07g1131 492 CDD STKc_TDY_MAPK 24 361 - -
Cec07g1131 492 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1924 Cec-Chr2:37076918 Cec07g1131 Cec-Chr7:26556051 2.10E-206 dispersed
Cec07g1131 Cec-Chr7:26556051 Cec09g2339 Cec-Chr9:40244236 7.80E-204 dispersed
Cec04g2088 Cec-Chr4:38837804 Cec07g1131 Cec-Chr7:26556051 1.30E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72137 PF00069 Pkinase 8.00E-65 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1131 - - - 0.0