Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1132 ATGGTTGTTCGCTTGCCTGAAACTGACCATTATTACCCGGCACGGGCAGCAGTCATCCATAGAATGATTCATCCATCAAAGAACTTAAGAGGCTGTTGCAGGCAAAGCTTAAGTTGGGAGTGGCAGCCATTGCCATTGCTGCTCATTGAAGTAACTGAGATAGGCATAACCAACAGTAGGAGTCTTGATTTTGGAAGGCATGTTTTGGATTATGTTGCTTGTGGTTGTTCCTCCAATACTCCATTGGATCCACATACGGTTAGGAGTCATGTCAAACTGTCTACTAAGGACATTACTGGTGGTCCTCAACCATTCTTCGAACTGAGGAAGGAGTCCAGAAGCCCAATCTCATCGACAAGTTTGTTTGAAGTTATAGCCGATGATCTCCAGAAGCTTAACCAAAATCTCCTGTCTATGGTTGGTAAGGAGAACCCAGCCTTGGTATCTGCTGCTCAGCGGATATTTGGTGCTGGAGGGAAGAGGATGAGACCAGCTCTGGTATTCCTGGTGTCAAGAGCAACGGCCGGATTGGTTGGGTTAGAGGAACTCACTGTGGAGCATCGGAGTTTGGCAGAGATCATTGAGATGATCCACACTGCAAGCTTGATACATGATGATGTCTTAGATGATAGTGATATGAGGAGAGGGAAGGAAACCTTGCATCAATTATACGGTACCAGAGTGGCGGTGTTGGCTGGAGATTTCATGTTTGCACAGTCATCTTGGTGTCTTGCTAACCTTGAAAACCTTGAAGTCATTAAGCTTATCAGTCAGGTTATTAAAGATTTTGCAAGTGGTGAAATAAAGCAGGCGTCAAGCCTGTTTGATTGTGAGGTTGAGCTGGATGAATATTTGATTAAAAGCTATTATAAAACAGCTTCCTTGATTGCTGCTAGTACCAAAGGTGCTGCGATCTTTAGTGGGGTTGATCGGGATATGACCGAGAAAATGTACGAGTATGGAAAGAATCTTGGTCTCTCATTCCAAATTGTCGATGACATATTGGACTTTACACAATCAACAAAGCAGCTTGGGAAGCCAGCGGGAAGTGATCTGGCTAAAGGAAATCTGACAGCCCCAGTTATATTTGCTCTGGAGAGAGAGCCGAAATTGAAAGACATTATCGAATCAGAATTCAGTGAGCCGGGGTCTCTCAAAGAAGCCATCCGCATAGTCAAGAGCAGTGGTGGCATTGAAAGAGCGCAGGAATTAGCTAAAGAAAAGGCTGATCTTGCTATCCAAAACCTACAATGCCTTCCACAAAGTACCTTTCGGTTAGCGCTCGAGGATATGTCTGCTGCAATCCCTCGGAAATCACAAATAGAGACTACCTTTTGCCGTCACACAAGCTCTGATGCTACGGGCCGGCCCAATATTCCGGCCCATCTCTTCAACTTCGTCTTCTCCAAAGATCCATCGACGACGCTTTCTCCAAGCGAATTACAGAGAAAGTTCGACTCGAGTGAAAAGAGAGGTTCCATGGGACAGTGGAGAAGCATAGTGAAGGAGGCAATCGATCGCTCAGCCATAATAGCCAAGTTCCTCTGCTTGCTTCACGTGTATGGCCCTAGCATGCTCCCAACCTTGAATCTGACCGGCGATGTTCTTTTGGCCGAGCACGTGTCGCACCGAGTGGGCAGGGTTGGCCCTGGCGACGTTGTGCTGGTTCGCTCTCCTCTGAACCCGAGGAAGACGTTGACGAAGCGCATTCTGGGCGTCGAGGGTGATAAGGTCAATTTCTTTCCGGACCCTGCCAATTCCAATCGGTATCAGTCGGCTGTGGTTCCGAAAGGGCATGTGTGGATTCAAGGAGATAATGTGTATGCTTCTAGTGATTCGCGGCATTTCGGGCCTGTACCTTACGGTCTGGCCACCAGATTGTTTTGGACCATTGGAACAATAAACTCAGATATACCGAACTTAAAAGATAAATTGCTGACGTGGGCACTGGTGGTGGCGTTAAGTATTGAGGCTTTAGTGAATAAGGCTTTAGTGAGAATGCATATGAAGAGCTGGGGACTTCATTTTGTGGCTATTGTAAATGAGCTATTGCTGTGA 2058 46.55 MVVRLPETDHYYPARAAVIHRMIHPSKNLRGCCRQSLSWEWQPLPLLLIEVTEIGITNSRSLDFGRHVLDYVACGCSSNTPLDPHTVRSHVKLSTKDITGGPQPFFELRKESRSPISSTSLFEVIADDLQKLNQNLLSMVGKENPALVSAAQRIFGAGGKRMRPALVFLVSRATAGLVGLEELTVEHRSLAEIIEMIHTASLIHDDVLDDSDMRRGKETLHQLYGTRVAVLAGDFMFAQSSWCLANLENLEVIKLISQVIKDFASGEIKQASSLFDCEVELDEYLIKSYYKTASLIAASTKGAAIFSGVDRDMTEKMYEYGKNLGLSFQIVDDILDFTQSTKQLGKPAGSDLAKGNLTAPVIFALEREPKLKDIIESEFSEPGSLKEAIRIVKSSGGIERAQELAKEKADLAIQNLQCLPQSTFRLALEDMSAAIPRKSQIETTFCRHTSSDATGRPNIPAHLFNFVFSKDPSTTLSPSELQRKFDSSEKRGSMGQWRSIVKEAIDRSAIIAKFLCLLHVYGPSMLPTLNLTGDVLLAEHVSHRVGRVGPGDVVLVRSPLNPRKTLTKRILGVEGDKVNFFPDPANSNRYQSAVVPKGHVWIQGDNVYASSDSRHFGPVPYGLATRLFWTIGTINSDIPNLKDKLLTWALVVALSIEALVNKALVRMHMKSWGLHFVAIVNELLL 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26559964 26570364 + CePI673135_07g011320.1 Cec07g1132 207911

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1132 685 ProSitePatterns Polyprenyl synthases signature 1. 202 216 IPR033749 -
Cec07g1132 685 ProSitePatterns Polyprenyl synthases signature 2. 324 336 IPR033749 -
Cec07g1132 685 CDD Trans_IPPS_HT 143 435 IPR000092 GO:0004659(InterPro)|GO:0008299(InterPro)
Cec07g1132 685 CDD S26_SPase_I 520 623 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec07g1132 685 Gene3D Umud Fragment, subunit A 511 640 - -
Cec07g1132 685 NCBIfam solanesyl diphosphate synthase 116 433 - -
Cec07g1132 685 SUPERFAMILY Terpenoid synthases 119 434 IPR008949 -
Cec07g1132 685 PRINTS Bacterial leader peptidase 1 (S26A) family signature 566 578 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cec07g1132 685 PRINTS Bacterial leader peptidase 1 (S26A) family signature 513 529 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cec07g1132 685 PRINTS Bacterial leader peptidase 1 (S26A) family signature 595 614 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Cec07g1132 685 SFLD Isoprenoid Synthase Type I 148 429 - -
Cec07g1132 685 ProSitePatterns Signal peptidases I signature 3. 600 613 IPR019758 GO:0004252(InterPro)|GO:0016020(InterPro)
Cec07g1132 685 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 110 433 - GO:0004659(PANTHER)|GO:0008299(PANTHER)|GO:0009507(PANTHER)|GO:0010236(PANTHER)
Cec07g1132 685 Gene3D Farnesyl Diphosphate Synthase 116 438 IPR008949 -
Cec07g1132 685 Pfam Signal peptidase, peptidase S26 591 620 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec07g1132 685 Pfam Signal peptidase, peptidase S26 517 580 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Cec07g1132 685 SUPERFAMILY LexA/Signal peptidase 518 631 IPR036286 -
Cec07g1132 685 FunFam Inner membrane protease subunit 1 512 637 - -
Cec07g1132 685 Pfam Polyprenyl synthetase 146 391 IPR000092 GO:0004659(InterPro)|GO:0008299(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1132 K05356 - - csv:101214140 667.151
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1306 Cec-Chr4:32647577 Cec07g1132 Cec-Chr7:26559964 2.50E-29 dispersed
Cec04g2148 Cec-Chr4:39295042 Cec07g1132 Cec-Chr7:26559964 2.60E-30 dispersed
Cec04g2189 Cec-Chr4:39643496 Cec07g1132 Cec-Chr7:26559964 6.70E-63 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g11 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla07g00987 Cam07g1061 Cec07g1132 Cco07g1109 Clacu07g1033 Cmu07g1026 Cre07g1404 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006158 2 1 2 1 2 1 2 1 1 2 0 1 1 1 2 2 1 2 2 1 1 1 1 1 1 0 1 2 1 1 38