Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1142 ATGGTGGTTTTGTCCAAACCATCAATCCAACAGTTGTCTTCTAATTCCTTCATGAGAAATTCCATGTCATCATCCATGGCTGCTGCTGCTTCTTCCTCTGCAGCATTTTTCTCTGAGGTTCCATTCATAGACCTTTCTGCACCAGATGCTAAACAACTCATTGTCAAAGCTTGTGAAGAGCTTGGATTTTTCAAGGTCGTCAACCATGGCGTCCCCATGGAATTCATTTCTACTCTCGAATCAGAATCCACCAATTTCTTCTCCCTTCCACTCTCTGAAAAACAAAAAGCTGCTCCTCCTTCCCCTTTTGGCTATGGCAACAAGCAAATTGGTCGCAATGGCGACGTCGGTTGGGTCGAATATCTTCTCTTAAACACTCACCTAGAATCCAACTCCGATGGGTTCCTCTCCATTTTTGGCCAAGACCCACAAAAACTCCGCTCTGCTGTGAACAATTACATCTCGGCTGTGAGGAATATGGCGTGTGAAATCCTTGAGTTAATGGCGGAAGGATTGAAGATTCAACAGAGGAATGTGTTCAGTAAGCTGGTGATGGATGAAGAGAGTGACTCTGTTTTCAGAGTGAACCATTATCCGCCATGTCCAGAGCTTCAAGCTTTGAAAGAGAGGAACATGATTGGATTTGGAGAACACACAGACCCACAAATCATATCGGTTTTGAGATCCAACAATACTTCTGGACTACAAATTTCTCTTGCTGATGGGAATTGGATTTCTGTTCCTCCTGATCAGAATTCCTTTTTCATTAATGTTGGTGACTCTTTACAGGTGATGACTAATGGAAGATTCAAAAGTGTGAAGCATAGGGTTTTGACAAATAGCTTGAAGTCAAGAATTTCAATGATATACTTTGGTGGGCCACCTTTGAGTGAAAAGATAGCTCCTTTGCCTTCTCTTATGAAAGGAGAAGAAAGAAGTTTGTACAAAGAGTTTACTTGGTTTGAGTACAAAAGATCAGCTTACAACTCCAGGTTGGCAGATAACAGGCTTGTGCACTTTGAAAGAATTGCAGCCTCATAA 1041 42.07 MVVLSKPSIQQLSSNSFMRNSMSSSMAAAASSSAAFFSEVPFIDLSAPDAKQLIVKACEELGFFKVVNHGVPMEFISTLESESTNFFSLPLSEKQKAAPPSPFGYGNKQIGRNGDVGWVEYLLLNTHLESNSDGFLSIFGQDPQKLRSAVNNYISAVRNMACEILELMAEGLKIQQRNVFSKLVMDEESDSVFRVNHYPPCPELQALKERNMIGFGEHTDPQIISVLRSNNTSGLQISLADGNWISVPPDQNSFFINVGDSLQVMTNGRFKSVKHRVLTNSLKSRISMIYFGGPPLSEKIAPLPSLMKGEERSLYKEFTWFEYKRSAYNSRLADNRLVHFERIAAS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26680243 26681806 + CePI673135_07g011420.1 Cec07g1142 207921

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1142 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 294 IPR005123 -
Cec07g1142 346 PRINTS Isopenicillin N synthase signature 218 239 - -
Cec07g1142 346 PRINTS Isopenicillin N synthase signature 254 280 - -
Cec07g1142 346 PRINTS Isopenicillin N synthase signature 54 71 - -
Cec07g1142 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 131 IPR026992 -
Cec07g1142 346 Pfam 2OG-Fe(II) oxygenase superfamily 190 292 IPR044861 -
Cec07g1142 346 Gene3D - 3 334 IPR027443 -
Cec07g1142 346 FunFam Gibberellin 2-beta-dioxygenase 1 20 333 - -
Cec07g1142 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 38 324 IPR050231 GO:0009416(PANTHER)|GO:0016706(PANTHER)|GO:0045487(PANTHER)|GO:0052634(PANTHER)
Cec07g1142 346 SUPERFAMILY Clavaminate synthase-like 35 334 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1142 K04125 - - csv:101215820 615.92
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0728 Cec-Chr3:7947546 Cec07g1142 Cec-Chr7:26680243 1.20E-118 dispersed
Cec04g2165 Cec-Chr4:39412697 Cec07g1142 Cec-Chr7:26680243 6.10E-112 dispersed
Cec07g1142 Cec-Chr7:26680243 Cec09g0488 Cec-Chr9:4153231 1.80E-77 dispersed
Cec11g1768 Cec-Chr11:31867428 Cec07g1142 Cec-Chr7:26680243 2.30E-35 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g898 . . . . . . . . Cmo16g00489 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cma16g00453 . Car16g00411 Cpe14g00383 . . . . . . . . Cla07g00995 Cam07g1070 Cec07g1142 Cco07g1120 Clacu07g1044 Cmu07g1035 Cre07g1411 . . Chy07g01013 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004421 1 1 2 3 1 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 3 1 2 43