Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec07g1159 | ATGCAAGAACAAGATTCCTGTTCCGGCCCGGGTGAAGGGGTATCCATTCCGGAATTTACCTTGACTTCTCCTGATCTAGTTATCTGTGCTGGTTCTCCTGATATTCCAGTAGACAACTACTGTGATTCACCAGAATTCTTGGATATCAAGGGTTGTAAACCTATGGAATCTTCCATGGAGCTTTCCTTTGAAAATAGCTTTTCTGGAATTGAGGTTAACTACAATCAGAGGACCCCATCTGTTAGATTTTCCAAGTTGTGTAAAACCTACGAGGAAGAACTGTCTCCAGGATCTTCCTTTGAGTTGGCTCCTCCTCCAGCTACGACTTCTCTGCAATCTGAAGAACTCCTTCAAGCTGTTAGTATCAATGCAGGTTCCTCAAATGATGCTGTCACTTTGGATGGTATGAACTATGTGGAAGACAATTGCTACAACGGTGGTGATACCATTAGGTCTGATGAAATTGAACATCCTCTATACCAAACGGCTCGTTACGGGAACTTTTATTACAATTTCTCATCATTGGAACCTGGGAATTATGTTGTTGATCTGCATTTTGCTGAAATTGTATTTACCAATGGCCCTCCTGGTATGAGGGTGTTCGATGTCTATTTGCAAGACCAGAAGGTTGTTTCTGGCCTGGATATATATGCTCGTGTTGGTGGGAATAAGCCTCTCATTGTATCTGACCTTAAAACTTCTGTAGATGTAAAAGATTTAACCGTTAGATTTGAAGGACTGATGGGGAGGCCAATTGTTTGTGGTATTTCTGTGAGGAAAGATCTTCCTTCAAATATTAAAGAAGTTGAACTGGTCGAAGATGTGGGATCTTCTCAACTAGAAAACTCAGAGATGTCCAAAGATGGTAGTGACTTGATAGTGAAAGAGAAGAAGTACATAGAGCTCCAAAAGGATTTTGAGCTCATGAAGAATGAGCTAGCAGCAGCAAAGAAAGATATGGAGGAACTTCGAAAGGAAAACAATCAAAAGGGTAGAGAATGTCAAGAAGCTTGGAAGTCTCTAAATGACCTACAAAATGAGCTCATGCGCAAGTCAATGCATGTTGGATCTCTTGCTTTTGCCATTGAGGGACAGGTGAAAGAGAAGAGCAGATGGTTTTCTTCATTGAGGGACCTTACCAGAAAAGTAAAGATTATGAAAATGGAAAACATCAAACTATCGGAGGAGGCGCTTGCATTCAAGAACTGCTTTGTGGATATGAATGAAATGAATTCTAAAATTCAGACAGCATTTAAACAGCAATTAGATTTGCAAGAAAACTTGAAGACTAAATTTGTTGAAGGAGCTAAGGAACGGAAGGAACTCTACAATAAGATGTTGGAGTTGAAAGGAAACATTAGGGTCTTTTGTCGGTGTAGACCCTTGAATACAGAAGAAATTGCATCTGGAGCTCCAATGGTTGTTGATTTTGAGTCAGCCAAAGATGGCGAGTTGATTGTTAAGTCAAATGGGGCTCCCAGAAGGATCTTTAAATTTGATGCTGTATTTGGTCCTCAGGCAAATCAAGGAGATGTCTTTGAAGATACTGCGCCATTTGCGGCTTCAGTTCTAGATGGGTACAATGTTTGCATATTTGCATATGGCCAAACCGGAACTGGAAAAACTTTTACAATGGAGGGCACTGAAGGAGCTCGTGGAGTCAATTATAGGATTCTTGAGGAGTTGTTTCGCCTAACAAAGGAACGGCAGAAGCTACATCGATATAAAGTATCTGTTAGTGTCTTGGAAGTGTATAATGAACAAATACGAGACTTGCTAGTCTCAGGATCTCAGTCAGGGAACAGTGCAAAAAGGCTCGAAGTAAGACAAATCAGTGAAGGAATACATCATGTTCCTGGCATGGTTGAGGCCCCTGTCGACAACATGAATGAAGTTTGGGAAGTTTTACAAACGGGCAGTAACGCAAGAGCTGTTGGTTCAACCAATTGTAATGAGCACAGCAGCCGATCCCACTGCATACATTGTGTGATGGTGAAGGGGGAGAATTTGCTTAATGGGGAATGCACTAGCAGCAAACTCTGGTTGGTGGACTTGGCAGGTAGCGAGCGGATTGCTAAAGTAGAAGTACAGGGAGAACGACTCAAGGAAACACAAAATATTAACAGATCTCTTTCTGCACTTGGTGATGTAATATCTGCTCTTGCAACAAAAAGCCCTCATGTTCCTTTCAGGAACTCCAAGCTCACTCACTTGCTTCAAGATTCACTAGGGGGAGATTCGAAGACACTCATGTTCGTACAGATCAGTCCCAACGAAAACGACTTGAATGAGACTCTTTGCTCATTGAACTTTGCAAGCAGAGTAAGAGGAATCGAGTTGGGTCCTGCAAAGAGACAGCTTGATATGTCTGAATTCCTTAAATGCAAACAGATGACTGAGAAAACAAAGCAGGATATGAAGAGTAAAGATCTACAGATCAGAAAAATGGAAGAAACAATTCATGGATTAGACTTGAAGATGAAGGAAAAAGATCAAAAAAACAAAAATCTACAAGACAAGGTCAAAGAACTTGAAGCTCAACTTCTTGTTGAAAGAAAGCTAGCACGTCAGCATGTCGACACCAAAATAGCAGAGCAACAAATGAAAACCGAATCGGAAGACCACAAGCCTGCACCAGTGAGGCCTCAACTTGGTAGTAGATCATTTGGTGGTCCAAAAAATCTCCATGGATCATTCAACAGCATACTTGGAAAGGAGCAAATAAATCTCAGTCGCCCACTAACCGAAAACAACGGCTTCAAACCGTCATTTCCCTTTCCTCCAGTAGATGGTGCCATCAAGTACACTGATTCCACAGAGAAGGAGAACAATCCAGAGATGGTTGAACGATCTTTTGTGCTGCCACCAAAGAGGACAGGAAGAGCGTCCATTTGCACAATGGCCCGATGTGTACCGATGGCCCTTGCTCCTAGGAGAAACTCCCTAGTCCCTCTACGAAATATACCAAGCTCTACTCATCTCCCATCACCCATGTTGTCATTGGCACCATGTCAAGCTGACAAGATAGACGAAGGTGACGAATCAGATGACCATAACTGCTTACCTGAACAGGCACAATGCGACAGTCCTAAAGAGATAAAATATGGAGATAAAAAGTTGAGCAACATGTTGAGACGAAGCCTTCAAAAGAAGATACAAATGAAGTCTCCAATGCAACAACATATGAGACGAGGTGGTATCAATCTAGGGATGGAGAAAGTCAGGGTCTCCATCGGAGGCCGAGGAAGGTTAGCAGCGCACAGGGTGTTGTTAGGGAATGGTAAGAGAGTAACTAAAGAAACTCAAAGTAAGAGGGAAAAGGAGAGGGGTTGGAATATGGGAACAACAGTTGGGAGAACTGTTATTTAG | 3369 | 42.18 | MQEQDSCSGPGEGVSIPEFTLTSPDLVICAGSPDIPVDNYCDSPEFLDIKGCKPMESSMELSFENSFSGIEVNYNQRTPSVRFSKLCKTYEEELSPGSSFELAPPPATTSLQSEELLQAVSINAGSSNDAVTLDGMNYVEDNCYNGGDTIRSDEIEHPLYQTARYGNFYYNFSSLEPGNYVVDLHFAEIVFTNGPPGMRVFDVYLQDQKVVSGLDIYARVGGNKPLIVSDLKTSVDVKDLTVRFEGLMGRPIVCGISVRKDLPSNIKEVELVEDVGSSQLENSEMSKDGSDLIVKEKKYIELQKDFELMKNELAAAKKDMEELRKENNQKGRECQEAWKSLNDLQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKVKIMKMENIKLSEEALAFKNCFVDMNEMNSKIQTAFKQQLDLQENLKTKFVEGAKERKELYNKMLELKGNIRVFCRCRPLNTEEIASGAPMVVDFESAKDGELIVKSNGAPRRIFKFDAVFGPQANQGDVFEDTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGTEGARGVNYRILEELFRLTKERQKLHRYKVSVSVLEVYNEQIRDLLVSGSQSGNSAKRLEVRQISEGIHHVPGMVEAPVDNMNEVWEVLQTGSNARAVGSTNCNEHSSRSHCIHCVMVKGENLLNGECTSSKLWLVDLAGSERIAKVEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLNETLCSLNFASRVRGIELGPAKRQLDMSEFLKCKQMTEKTKQDMKSKDLQIRKMEETIHGLDLKMKEKDQKNKNLQDKVKELEAQLLVERKLARQHVDTKIAEQQMKTESEDHKPAPVRPQLGSRSFGGPKNLHGSFNSILGKEQINLSRPLTENNGFKPSFPFPPVDGAIKYTDSTEKENNPEMVERSFVLPPKRTGRASICTMARCVPMALAPRRNSLVPLRNIPSSTHLPSPMLSLAPCQADKIDEGDESDDHNCLPEQAQCDSPKEIKYGDKKLSNMLRRSLQKKIQMKSPMQQHMRRGGINLGMEKVRVSIGGRGRLAAHRVLLGNGKRVTKETQSKREKERGWNMGTTVGRTVI | 1122 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 26975015 | 26980153 | - | CePI673135_07g011590.1 | Cec07g1159 | 207938 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec07g1159 | 1122 | ProSiteProfiles | Kinesin motor domain profile. | 452 | 778 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | SMART | kinesin_4 | 450 | 786 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | Coils | Coil | 376 | 396 | - | - | |
| Cec07g1159 | 1122 | Coils | Coil | 299 | 333 | - | - | |
| Cec07g1159 | 1122 | Gene3D | - | 118 | 262 | - | - | |
| Cec07g1159 | 1122 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 78 | 1098 | IPR027640 | GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER) | |
| Cec07g1159 | 1122 | Coils | Coil | 813 | 854 | - | - | |
| Cec07g1159 | 1122 | PRINTS | Kinesin heavy chain signature | 728 | 749 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | PRINTS | Kinesin heavy chain signature | 526 | 547 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | PRINTS | Kinesin heavy chain signature | 679 | 697 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | PRINTS | Kinesin heavy chain signature | 648 | 665 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | Gene3D | Kinesin motor domain | 395 | 780 | IPR036961 | - | |
| Cec07g1159 | 1122 | Pfam | Kinesin motor domain | 458 | 778 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cec07g1159 | 1122 | MobiDBLite | consensus disorder prediction | 866 | 880 | - | - | |
| Cec07g1159 | 1122 | CDD | KISc_C_terminal | 450 | 780 | - | - | |
| Cec07g1159 | 1122 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 452 | 815 | IPR027417 | - | |
| Cec07g1159 | 1122 | MobiDBLite | consensus disorder prediction | 866 | 892 | - | - | |
| Cec07g1159 | 1122 | Pfam | Malectin domain | 120 | 251 | IPR021720 | - | |
| Cec07g1159 | 1122 | ProSitePatterns | Kinesin motor domain signature. | 678 | 689 | IPR019821 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro) | |
| Cec07g1159 | 1122 | FunFam | kinesin-like protein KIN-14R | 397 | 780 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec07g1159 | K27887 | - | - | csv:101222343 | 2028.06 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g1664 | Cec-Chr2:34306532 | Cec07g1159 | Cec-Chr7:26975015 | 1.30E-139 | dispersed | |
| Cec03g0497 | Cec-Chr3:5220641 | Cec07g1159 | Cec-Chr7:26975015 | 8.90E-81 | dispersed | |
| Cec03g1700 | Cec-Chr3:35229397 | Cec07g1159 | Cec-Chr7:26975015 | 3.40E-67 | dispersed | |
| Cec04g1535 | Cec-Chr4:34846957 | Cec07g1159 | Cec-Chr7:26975015 | 6.30E-64 | dispersed | |
| Cec06g0736 | Cec-Chr6:8511678 | Cec07g1159 | Cec-Chr7:26975015 | 5.00E-28 | dispersed | |
| Cec07g1159 | Cec-Chr7:26975015 | Cec09g2255 | Cec-Chr9:39404697 | 9.70E-85 | dispersed | |
| Cec07g1159 | Cec-Chr7:26975015 | Cec05g1655 | Cec-Chr5:27163072 | 7.70E-82 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi19g956 | . | . | . | . | Bpe09g00290 | . | . | Bma13g00898 | Cmo16g00505 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone15ag0984 | . | . | . | . | . | Blo10g00686 | . | . | . | . | . | . | . | . | . | Cma04g00636 | Cma16g00466 | Car04g00595 | Car16g00421 | . | Cpe01g00574 | . | . | . | . | . | . | . | Cla07g01010 | Cam07g1087 | Cec07g1159 | Cco07g1137 | Clacu07g1061 | Cmu07g1052 | Cre07g1428 | . | . | Chy07g01045 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0003005 | 3 | 2 | 3 | 3 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 47 |