Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1165 ATGTTAACTAGAGCAAGACCGAATCAACTTGCTAGTCCTCGATCTAGGAAAATAACTAATAAGGCATATCCTACGCAGCTATTTGGTTTAAGGGTCAAGATTAAAGCAGCAAACAATGGCGACTGTCGTTTGAATTTTCAAAAGGGGCATGACGATGAACTTGATTTTGGAAGTGAATTCTGGGTTCAGGAAATCCGGAAGATAAGTAATTTCTCTGGAGAATTTTCAAGCATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGAGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGGTGCTGTGTGGATGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTCGCCCAAACTCTTCTTGGGCGAGGTTACAGTAGCATCCAGTTTAATTGGCAAACAAGGTCTAAGATTTGCATTGGAATTGCATGTGGCCTTGCCTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCGAGCAACATTCTTCTTGATCACGACCTCTCTCCTAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCGATAAGAGGGCAGGTGACAAGAAAATCAGATATTTACAGTTTTGGAGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACACAAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTTTATGAGCGAGGAGAGCTCGTTCTGCTAGTTGATTCGTCCTTAAATGGCGACTTCGATGCAGAGGAGGCTTGTAAATATCTAAAGATTGGTCTACTTTGCACACAAGACAGTCCAAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACAGGAGAGATGAGTATTGAAGACAGAAAGATAACGAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGAATCCAGAGGAAAAGAAAGGGAATAGAGAGGGGGTGTCTTCTGATAGTCTATCCTCTGGATCAAACATCCTTGGAAACTCAACAATGTCATCTGAAGCCTCAACTGTTACATCTACAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGTAATGTGA 1344 40.77 MLTRARPNQLASPRSRKITNKAYPTQLFGLRVKIKAANNGDCRLNFQKGHDDELDFGSEFWVQEIRKISNFSGEFSSMQNVKFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESRQGLREFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSIQFNWQTRSKICIGIACGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLYERGELVLLVDSSLNGDFDAEEACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLISDFMDLKVKNPEEKKGNREGVSSDSLSSGSNILGNSTMSSEASTVTSTTFTAQYDRNTFSSVM 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27046752 27051985 - CePI673135_07g011650.1 Cec07g1165 207944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1165 447 FunFam cold-responsive protein kinase 1 172 383 - -
Cec07g1165 447 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1165 447 Pfam Protein kinase domain 98 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1165 447 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
Cec07g1165 447 MobiDBLite consensus disorder prediction 405 431 - -
Cec07g1165 447 Gene3D Transferase(Phosphotransferase) domain 1 172 381 - -
Cec07g1165 447 MobiDBLite consensus disorder prediction 394 431 - -
Cec07g1165 447 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524(InterPro)
Cec07g1165 447 CDD STKc_IRAK 102 369 - -
Cec07g1165 447 SMART serkin_6 96 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1165 447 FunFam cold-responsive protein kinase 1 62 171 - -
Cec07g1165 447 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 68 403 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec07g1165 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1165 447 Gene3D Phosphorylase Kinase; domain 1 66 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1034 Cec-Chr4:29908842 Cec07g1165 Cec-Chr7:27046752 2.30E-99 dispersed
Cec06g1792 Cec-Chr6:31378335 Cec07g1165 Cec-Chr7:27046752 9.90E-58 dispersed
Cec07g1165 Cec-Chr7:27046752 Cec10g2200 Cec-Chr10:36442751 1.90E-92 dispersed
Cec07g1165 Cec-Chr7:27046752 Cec07g1128 Cec-Chr7:26516638 4.40E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72139 PF00069 Pkinase 1.10E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1165 - - - 0.0