Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1174 ATGGAGTTGGCAAAGACGACGACGATGAAGACGAAGACGATGAAGTTGGTTTTGTTGATTGCAGTTTCAGTCATGGTGGTTGTGATATCACAGCAATTTTGGATGCCATCTTTTGACTTGAATCATCTTTGGAGAACTGTTTCTTACCATGGCTTTACAAACAATTATCCAAGAAACAACGATAAATTCATCGATGGCCTTCTTCCTCCAGGCTTTGACCAAAAATCCTGCTTAAGCCGATACCAACTAAATCTCTACAAAAAACCCTCTCCTCACTACCCCTCTTTCCCTCTCCTCTCAAAGCTTCGTCGCTATGAAGCTCTCCACAGCCGTTGCGGCCCCAATTCCCCGTCATTCCGCCGAGCTCTCGTCAGTCTTACCTCACCCACAAACTCCACATCCTCATCCGAGGACGATTGCAAATATCTCGTCATTTTAACCCGCGATGGCCTTGGCAACCGAATCCTCGCCCTTCTCTCTGCCTTCTTCTATGCCCTAATCGCCAATCGCGTCATTCTAATCGACCAAGGCAACATTCTTGATGATCTATTCTGTGAGCCCTTTCTCGGATCCTCCTGGCTTCTTCCCTCCGATTTTCCTCTCCGTCACAAATTTGGGTCGTTCCGTCAATCCTTCCCGAGGTCTTTTGGCAATATTTTGAAGAATGGAATGTTGAAAAAAACAATCGAAGATTCACCTCCGCCTTATTTGTATCTTCATCTCTCTCATGACGCCGGCGACTATGATAAGCTCTTTTATTGCGACCGACAACAAAATCTTCTAAAGAAGGTCCCATGGTTGATTATGGAGACAAATAACTACCTGGTTCCGGGAATTTTTCTAGTTTCTTCTTTCAGAGAAGAGCTTAATAAACTCTTTCCGGTGAAGGACACTGTGTTTCACCATCTGGGACGGTACCTTTTCCACCCGACAAATGACGTTTGGGGGCTGATTTTGAGATCTTACAAGCCATATTTTTCTAGAGCAAACGAAATGGTCGGGATTCAAATCCGAATTTTTGGGTCAGAATCTGGGTCGATTCAGGACCAAATGAATCAACTTCTAGTTTGCACACAGAAGAAGAAATTACTACCTGAGCTCGAGCCATCATCACCAGTGAAGATGAACTCCACCTCTCAGAAGGTGAAAGTTGTGCTAGTGACGTCTCTAAGCGCTCAATACTCAGAAACCTTAAAGGAGATGTATTGGGATCATCCGACTGTCGACGGCGAGGTGGTGGCAGTGTACCAGCCGAGCCACGAGAGGATTCAAAGCTCCAACAGTAGGATGCACAACCGGAAGGCATTGGCGGAGATGTACCTTTTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACATTTGGATATGTGGCACAGGGGCTGGCCGGAGTGAAGCCATGGATGCTTTACAAGCCGGAGGATAAGGTGTTTTGGGCGTTACAACAATGGCTAAAGTACAGAACGAGGAACGAGACGACTAACGACTGGCCATGCCGGCAGGCGGTGTCCATGGAGCCATGCCTCCACGTGCCGCCGGTGTGCGATTGCGATGAGATGAAAAGAAGGGATGCAGGGAATGTTTTGCCGTATGTGATTCATTGTGAAGACGCAAGTTGGGGCCTTAAGTTAGGCTGA 1641 47.23 MELAKTTTMKTKTMKLVLLIAVSVMVVVISQQFWMPSFDLNHLWRTVSYHGFTNNYPRNNDKFIDGLLPPGFDQKSCLSRYQLNLYKKPSPHYPSFPLLSKLRRYEALHSRCGPNSPSFRRALVSLTSPTNSTSSSEDDCKYLVILTRDGLGNRILALLSAFFYALIANRVILIDQGNILDDLFCEPFLGSSWLLPSDFPLRHKFGSFRQSFPRSFGNILKNGMLKKTIEDSPPPYLYLHLSHDAGDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLVSSFREELNKLFPVKDTVFHHLGRYLFHPTNDVWGLILRSYKPYFSRANEMVGIQIRIFGSESGSIQDQMNQLLVCTQKKKLLPELEPSSPVKMNSTSQKVKVVLVTSLSAQYSETLKEMYWDHPTVDGEVVAVYQPSHERIQSSNSRMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKPEDKVFWALQQWLKYRTRNETTNDWPCRQAVSMEPCLHVPPVCDCDEMKRRDAGNVLPYVIHCEDASWGLKLG 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27129318 27132656 - CePI673135_07g011740.1 Cec07g1174 207953

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1174 546 Pfam Xyloglucan fucosyltransferase 52 518 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cec07g1174 546 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 545 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cec07g1174 546 FunFam Galactoside 2-alpha-L-fucosyltransferase 138 189 - -
Cec07g1174 546 Gene3D - 319 480 - -
Cec07g1174 546 Gene3D - 138 186 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1174 K13681 - - csv:101222105 941.414
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1754 Cec-Chr1:32111396 Cec07g1174 Cec-Chr7:27129318 1.70E-141 dispersed
Cec07g1174 Cec-Chr7:27129318 Cec05g2639 Cec-Chr5:37109656 1.90E-158 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec05g2639 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.1 8.3e-159 557.4
Cec01g1754 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.6 3.2e-150 528.9
Cec05g2639 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 8.0e-167 583.9
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 58.1 6.6e-161 564.3
Cec07g1174 . 58 545 Xyloglucan Fucosyltransferase1 AT1G14100 50.1 7.5e-141 497.7
Cec05g2639 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.3 3.2e-138 488.8
Cec01g1754 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.4 1.2e-132 470.3
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 65.2 2.5e-192 668.7
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 61.5 1.4e-182 636.3
Cec08g0899 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.3 5.6e-168 587.4
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.0 2.4e-201 698.7
Cec01g1754 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 2.3e-188 655.6
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.7 1.8e-155 546.2
Cec01g1754 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.1 2.1e-143 506.1
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.1 5.4e-150 528.1
Cec01g1754 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.4 8.1e-138 487.6
Cec05g2639 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 4.0e-153 538.5
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 2.4e-142 502.7
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 1.0e-190 663.3
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 62.8 8.3e-185 643.7
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.0 2.4e-201 698.7
Cec01g1754 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 2.3e-188 655.6
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 4.0e-153 538.5
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 2.4e-142 502.7
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.1 5.4e-150 528.1
Cec01g1754 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.4 8.1e-138 487.6
Cec05g2639 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.1 8.3e-159 557.4
Cec01g1754 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.6 3.2e-150 528.9
Cec05g2639 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 8.0e-167 583.9
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 58.1 6.6e-161 564.3
Cec07g1174 . 58 545 Xyloglucan Fucosyltransferase1 AT1G14100 50.1 7.5e-141 497.7
Cec05g2639 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.3 3.2e-138 488.8
Cec01g1754 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.4 1.2e-132 470.3
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.7 1.8e-155 546.2
Cec01g1754 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.1 2.1e-143 506.1
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 1.0e-190 663.3
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 62.8 8.3e-185 643.7
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 65.2 2.5e-192 668.7
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 61.5 1.4e-182 636.3
Cec08g0899 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.3 5.6e-168 587.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 2 2 2 2 1 1 0 36