Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1187 ATGCTTCGCAGCTTAATTTCTCATTCCCCCATCAATTCCACCTCCAATTCCCCATCCTCCATGAACTCCAAACGCTCCGACCCCGACTCCGACTCCTCCCCCGACCACCCTTCTTCCAAGAGGCTCAATTCACGTCCCAACAACTTCTCCGCCCCCGGTAAGGCCGTCCACCACCCAGACTTCGACGAAGACCAAGAGGACCCGCCTCTCGTCGACGGCAGTGACTCCACTGGTTTGAGATTGCTAGGGCTTCTCCTTCAATGCGCCGAGTGCGTCGCCATCGATAATCTCCAGGAGGCCAACGATCTCTTGCCGGAGATCTCCGAGCTCTCCTCGCCCTTCGGAACCTCGCCTGAGCGAGTCGGCGCGTACTTCGCCCACGCGCTTCAAGCCAGAGTTATAAGCTCCTGCTTGGGAACATACTCGCCGTTAACCATCAGAACGTTGAATCAAACTCAGTCGCAGAGAATTTTCAACGCCCTCCAATCCTACAATTCCATCAGTCCGTTGATTAAGTTCTCTCACTTCACCGCCAATCAAGCCATCTTCCAAGCCTTGGACGGTGAAGATCGAGTCCACGTGATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTGTTCCACATCCTCGCTTCCCGGCCAAAGAAGATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGAGTTGCTTCAATCAACCGGAAGAAGACTGGCGGATTTTGCAACTTCTCTAGGTCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGAAACCTAACAAACCCCAATCAACTGGAATTGAGAGCCGGCGAGACAGTTGTAGTTCACTGGATGCACCATTGCTTATACGACGTAACAGGAAGCGATATAGGTACGCTTAGATTACTTTCAACTCTAAAACCAAAACTAATCAGCATTGTTGAACAAGATCTGAGTCATGGAGGTAGTTTTTTAGGAAGATTTGTAGAGGCTCTGCATTATTACAGCGCGTTATTCGACGCGCTTGGTGATAGTTTAACCATGGATAATCTGGAAAGACATGTGGTAGAGCAACAATTGTTTGGTTGCGAGATTAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACCGGTGAAGTTAAAGTCGAAAGATGGGGCGATGAACTGAAACGGGTCGGGTTTAAACCCGTTTCTCTTGGAGGTAACCCGGCTGCTCAAGCCAGTTTACTTCTTGGAATGTTTCCTTGGAAAGGCTATACTCTTGTTGAAGAAAATGGGTGCCTTAAACTTGGATGGAAGGACTTATCTCTTCTCACAGCCTCCGCCTGGCAGCCCTCCGATTGA 1338 50.3 MLRSLISHSPINSTSNSPSSMNSKRSDPDSDSSPDHPSSKRLNSRPNNFSAPGKAVHHPDFDEDQEDPPLVDGSDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSELLQSTGRRLADFATSLGLPFEFHPVEGKIGNLTNPNQLELRAGETVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKLISIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLTMDNLERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27259268 27260605 + CePI673135_07g011870.1 Cec07g1187 207966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1187 445 MobiDBLite consensus disorder prediction 1 74 - -
Cec07g1187 445 ProSiteProfiles GRAS family profile. 72 442 IPR005202 -
Cec07g1187 445 Pfam GRAS domain family 83 442 IPR005202 -
Cec07g1187 445 MobiDBLite consensus disorder prediction 1 27 - -
Cec07g1187 445 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 441 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0090610(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0727 Cec-Chr4:26459704 Cec07g1187 Cec-Chr7:27259268 8.70E-134 dispersed
Cec07g1187 Cec-Chr7:27259268 Cec09g0797 Cec-Chr9:7382011 8.30E-88 dispersed
Cec07g1187 Cec-Chr7:27259268 Cec10g2124 Cec-Chr10:35838549 6.00E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29938 PF03514 GRAS 2.60E-115 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1187 K27742 - csv:101212169 749.199