Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1198 ATGAATAATATTATCAAGTATAATAATCTCCTCACCAATCTTGCTCTATCTTCTCTTCTGCCTCTCCTTGCTTTCCTCTTTATGATCAATCCTACCCCTCCCTTCCCTTCCAATCTCGTCGTCTTTCGTGACTCCGTCGATTGTCGTCACCACCACCATCACCATCATAAAAACGCAACTGACGAACAGGACCAAACAACGATAACTTCCATTTGTGATAACTTTCCGACCACCCTCCTCCCACCAGAAACCACCAACACTTCTGTTTTTTGTGTTGACCGAAACGGTTGTTGCAACTTCACAACGGTTCAAGCAGCAGTCGACGCTGTGCCAAACTTGAGCTTCAAACGAAACCTAATTTGGATCAACGCTGGAATTTACTACGAGAAGGTGATGGTTCCAAAATCTAAACCAAACGTGACATTTCAAGGACAAGGCTATACAACCACCGCCATTGTTTGGAATGACACTGCCAATTCTTCCCATGGCACCTTTTATAGTGGCTCTGTCCAAGTCTTCTCTTCCAATTTTATTGCCAAGAATATAAGCTTCATGAATATGGCGCCAATTCCAGGGCCGGGCGACATCGGAGCACAGGCGGTGGCGATTAGAATCGGCGGAGACCAGGCGGCATTTTGGAGTTGCGGATTCTTCGGCGCTCAAGACACTCTCCACGACGACCGTGGCCGCCATTACTTCAAAGATTGCTACATCCAAGGCTCCATCGATGTCATCTTCGGAAATGGAAGATCCTTCTACGAGAGTTGCCAGTTGATTTCGATGGCGAATCCGGTCCCGCAAGGATCGAAGTTTGTGAACGGAGCGGTGACGGCGCACGGCAGAGCCTCCGCTGACGAGAACTCTGGATTTGTTTTTGTTAATTGCAGCATCGGCGGGACCGGCAGAGTGTGGCTCGGCCGCGCGTGGCGGCCGTTCTCTCGCGTCGTCTTTGCTAACACCGTCATGACGGATATTATTGCGGCGGAGGGGTGGAATGACTTTAATGACCCTGCAAGGGACCAGACAATCTTCTATGGAGAGTACAACTGCAGTGGAGCAGGAGCCAATATGAGCTCAAGGGCTCCCTTTGTTCAAAGGCTTAATGATACTCAAGTTTCCTCTTTCCTCAACTTATCCTTCATTGATGCTGACCAATGGCTCCAACCCTACTCATTGTTTTAA 1182 48.65 MNNIIKYNNLLTNLALSSLLPLLAFLFMINPTPPFPSNLVVFRDSVDCRHHHHHHHKNATDEQDQTTITSICDNFPTTLLPPETTNTSVFCVDRNGCCNFTTVQAAVDAVPNLSFKRNLIWINAGIYYEKVMVPKSKPNVTFQGQGYTTTAIVWNDTANSSHGTFYSGSVQVFSSNFIAKNISFMNMAPIPGPGDIGAQAVAIRIGGDQAAFWSCGFFGAQDTLHDDRGRHYFKDCYIQGSIDVIFGNGRSFYESCQLISMANPVPQGSKFVNGAVTAHGRASADENSGFVFVNCSIGGTGRVWLGRAWRPFSRVVFANTVMTDIIAAEGWNDFNDPARDQTIFYGEYNCSGAGANMSSRAPFVQRLNDTQVSSFLNLSFIDADQWLQPYSLF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27397052 27401574 + CePI673135_07g011980.1 Cec07g1198 207977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1198 393 SUPERFAMILY Pectin lyase-like 88 390 IPR011050 -
Cec07g1198 393 FunFam Pectinesterase 84 392 - -
Cec07g1198 393 Gene3D - 88 392 IPR012334 -
Cec07g1198 393 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 388 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cec07g1198 393 Pfam Pectinesterase 92 383 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1198 Cec-Chr7:27397052 Cec09g2213 Cec-Chr9:39055389 6.10E-66 dispersed
Cec07g1198 Cec-Chr7:27397052 Cec08g1540 Cec-Chr8:27075787 1.40E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1198 - - - 0.0