Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1215 | ATGGGATCCAGTGGAAGTAAATCGTCGAGTAGTTCGCTGCCGGCGGCGGAGACTCTCTCGTGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAAGCCGGAGAGTTTTCCAGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTCTGAAACTGAGAATAAAAAGAATGCTCATGATTATTCATCTTCAAATCAGACTGCTCAAGCATTAGATCAGATGAAAGTTGAGGGTTACAGAAGGGTTAAAGCTGAGGAATCTGTTGAAATGCCTTGCATATCATCAAACGTTGTGCTTGATGGATGGGATGAAGCAGGTGTTGCTGTTACAACCCCCATAGCTGGAAGTACCTCTGCTCGGGTATCTTCCCTGCAGTCGTTGAACCCTTCAAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCGGGTAATGTTAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCATCTAGATCTTATCCCGTGTCTTCAACAAATCTCTCAATGTTGAATGATGAAGACGAGCCTCATTTATCAGACAGACCTGCGAGAGGCGTGGGTGGTCAAGATGAAACTCAGCAAGGTAGGGACTTGCTTCCTGCATCACTAGCTAGTGAAACTCATACTCAATGTTATGGAGGCAGGTCTGCTAATTTTAGGTTAAATACACAACCTTCTGGTCCTTCTGATAACTTACAAGACAATCAGTCAGTTTCTTCTACCCGTGACATGGCTGGTTCTTGTGATAATTCTAGAGTAGGGCCAGATGGAAACCTTTCCCTTCCTCGAACTCTACATGAAAATGAAAGCAGTGAGATTAGACCATCTGACAGACGGGCTGGATCTAGGGAACCGGTTGAGCGCAATTTTCGTTTTAGTCGTACTCTTAGTGTTGGAAGACTCCGTGATAGAGTTCTTCGTCGATCATCGTTATCTGACTTCACATTTTGTCCTCCTCAACAAGAGGGAGATGAGAGAGATGCAAGTCACAGTGGCGATGACCAACATGTATGGACTGCTGAGACAAGGACTTTGGCATCTGAAGATAATGGTATGACCTCGCCAACAACATCAGGTTATCCAGCTTCTAGTCTATCCAGTTCCCTGTTCAGCACCCAAGATTTTGATGTGGAAGCTACTCGACCTAGAGAAGCTAGGTATCACGATTTACTGGAACATAGGTCAAATTTCCTTGAACGGAGAAGAAGAATACGGTCCCAGGTTCGTGCCCTACAGCGGCTGGGAAGTCGCTTTGAGAACCTATCTGGGCATGAGAGATCGTGTATATTATCCGGTCAACATAGAACCGGTCATTGTACTTGTCGTATCAATAATCGTGACACTAATATAAACGATAACACCAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCATCTTCTATTGGCTCTCTGCCTGCACCGAACGATGTTGTAGATTCTTTGCCTATTAAATTTTATTCCAAGTTGCAAAAGCATCAAAGCGAGGAAGCTGCCCAATGCTACATATGCCTGGTTGAGTATGAGGAAGGAGATAGCATGAGAGTGTTGCCTTGCCATCACGAGTTTCACGCAGCATGTGTCGACAAGTGGTTGAAGGAGATCCACAGGGTATGTCCACTCTGTCGAGGGGACATATGCAGCAGATCTGATGCGTTATCAGACGATGTCAAGTGA | 1767 | 45.39 | MGSSGSKSSSSSLPAAETLSCSGRIRRGRSKSRRVFQSACLGTPSGSHHSDNDDNDSETENKKNAHDYSSSNQTAQALDQMKVEGYRRVKAEESVEMPCISSNVVLDGWDEAGVAVTTPIAGSTSARVSSLQSLNPSSNFLSRFSFIPGNVSFRLSRASSLGSSRSYPVSSTNLSMLNDEDEPHLSDRPARGVGGQDETQQGRDLLPASLASETHTQCYGGRSANFRLNTQPSGPSDNLQDNQSVSSTRDMAGSCDNSRVGPDGNLSLPRTLHENESSEIRPSDRRAGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEGDERDASHSGDDQHVWTAETRTLASEDNGMTSPTTSGYPASSLSSSLFSTQDFDVEATRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNINDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSLPAPNDVVDSLPIKFYSKLQKHQSEEAAQCYICLVEYEEGDSMRVLPCHHEFHAACVDKWLKEIHRVCPLCRGDICSRSDALSDDVK | 588 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27649097 | 27652315 | - | CePI673135_07g012150.1 | Cec07g1215 | 207994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 321 | 372 | - | - | |
Cec07g1215 | 588 | Pfam | Ring finger domain | 530 | 573 | IPR001841 | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 161 | 202 | - | - | |
Cec07g1215 | 588 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 582 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 345 | 372 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 223 | 292 | - | - | |
Cec07g1215 | 588 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 493 | 578 | IPR013083 | - | |
Cec07g1215 | 588 | ProSiteProfiles | Zinc finger RING-type profile. | 531 | 573 | IPR001841 | - | |
Cec07g1215 | 588 | FunFam | Putative RING zinc finger domain superfamily protein | 499 | 578 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 49 | 65 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cec07g1215 | 588 | SUPERFAMILY | RING/U-box | 509 | 579 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 161 | 179 | - | - | |
Cec07g1215 | 588 | SMART | ring_2 | 531 | 572 | IPR001841 | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 330 | 344 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 223 | 254 | - | - | |
Cec07g1215 | 588 | MobiDBLite | consensus disorder prediction | 274 | 292 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1756 | Cec-Chr4:36543668 | Cec07g1215 | Cec-Chr7:27649097 | 8.40E-09 | dispersed | |
Cec06g1376 | Cec-Chr6:27275510 | Cec07g1215 | Cec-Chr7:27649097 | 2.90E-42 | dispersed | |
Cec07g1215 | Cec-Chr7:27649097 | Cec09g1172 | Cec-Chr9:11856415 | 7.00E-10 | dispersed | |
Cec07g1215 | Cec-Chr7:27649097 | Cec04g1249 | Cec-Chr4:32068712 | 5.40E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1215 | - | - | - | 0.0 |