Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1216 ATGCTGCTGGGTTCTTCTTGTTTCCAATTTCTTGTTGTTGTTGTTTTAGTCCACTTGGGTTGCTTGTCAATTAAGCAAACAAGGAAGAAGATGGCCAGTGAAAACTTTGGGTTATGGCTATTTTTTATTGCTTCTCTACAGTTTTTCCTTCAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGATGCTGGTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGATTTGGCTCGGGAGTTGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTTACCGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAGAAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTTACCGGAGACGTTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCAATAACCTACTTGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGTTCAGCGGGTGGATTGAGTTCCATTTTACATTGTGATAACTTCAAATCTCTACTTCCTCCTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTTATCAACGTGAAAGACGTCTCTGGAGCGCAGCACATTGAAGACTTCTACAGCGACGTAGTTGCTACCCATGGTTCTGCAAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCACGACTGCAAGCTTGACATCAAAAACTGCTCCCCCATTCAGATTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAACGGCGTTGGAAGTTCTTTATCAAGAGGGCTGTTCATAGATTCTTGCTATGCCCATTGCCAAACCGAAATGCAGGAGACATGGTTACGAGCGGATTCTCCCATGCTGAGTAAGACGGACTTGCGACATCTTTGCAAGAGCACGCTGGTTCATTTGTTTCCATGGAAGCTTAGACGCCCAGTAGGTTTTGCTAGAATGGATTGGGCATTCGTCCACAAAGCTTGGGACAGATGGGCTTCCGCCAGCATTGGCACCTTCGGCCAGCCATTGAAAGCTGCTCTGTTGATTAATTATGATCCAACTGGACCTTCCCGCTTGCTTTCAACCATTGCAGAACAAGAAGGAATATTGCTTAATCCCATAGAGCTGAATCAGTTTGTCGATTTCATCAAACGGGACAGACCCCAAAATGAGAGTTTCAGCATTGGCTCAAATCAATACATAATGACATCAGTCCATGAGAACTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAGGGTGTTGTTATAGTGCAAACAACAGCATTTATTTTGGTTGCTATGTATGATGGTTCAATTGCAGCAGCATCTCGTGCTATGGCAGCTGCGGATCAGTTATCTTGGCAATTAGGCAGGAAAAATCTTTAG 1683 43.32 MLLGSSCFQFLVVVVLVHLGCLSIKQTRKKMASENFGLWLFFIASLQFFLQAQCINVGITYVQDAGIKGAVCLDGSPPAYHFSDGFGSGVDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSKKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIINNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINVKDVSGAQHIEDFYSDVVATHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQIRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTDLRHLCKSTLVHLFPWKLRRPVGFARMDWAFVHKAWDRWASASIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDRPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMAAADQLSWQLGRKNL 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27659774 27667160 - CePI673135_07g012160.1 Cec07g1216 207995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1216 560 PANTHER NOTUM-RELATED 51 392 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cec07g1216 560 Pfam Profilin 456 555 IPR048278 GO:0003779(InterPro)
Cec07g1216 560 Gene3D Dynein light chain 2a, cytoplasmic 422 559 - -
Cec07g1216 560 SUPERFAMILY Profilin (actin-binding protein) 423 551 IPR036140 -
Cec07g1216 560 Pfam Pectinacetylesterase 51 391 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0955 Cec-Chr4:29239173 Cec07g1216 Cec-Chr7:27659774 9.80E-97 dispersed
Cec05g0979 Cec-Chr5:8521432 Cec07g1216 Cec-Chr7:27659774 7.10E-76 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1216 K19882 - vvi:100245856 782.711