Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1228 ATGGGGCAGTCGGTCACACGCTTGAAAACATCCCTCTTCGCACGTGCCACAGCGCCTCTTCAGTCTCACTCCAACGCCTCTCTGTCGAATATTCCACATGCTCTCAGACTCTCGCCCTCACTCTCCCTCTATCTCTCTCTCTCTCTAGAAGCAAGCTCCAAACTCAGCCTCTCGGTGATAGATAGATTTTGCCAAACCTCTCACGGACCGACCATTTTCTTTCTCTCTTCCACCTTTCTCTCTTTTACTCACCTGCATTTCTCTCCAATTGGATCTAAGATCGTATTGCAGTTACTTGGCTACTCTGATACGATTTTGGACTGGACTGGACTGGACTGGATTGTTATTGTTCTGTTTTGTTTCTTCTGGTTTGAGCAGTTACGGGTGGAGAGTGGTTGTAGTTCTGGTGCGCTACTGCATCTATTGAATACTATGATATTTAAGTCTTGTTTGGCCGAGGAAGAGTCGTTAAATGATTTGAGCTCGGCTTCAACCACAGTGCCACATGTCCAAGGAAACCTTTGGTCAGCTTGTTCTGTCAGATGGTTTATTGTAGACACCTCACCCTTGACCAGAGCCACCATGGGCATCTGTCTGGTCAAATGTTCTGGCTTGTTGGTTCTTCACGTTCTACTTCTTTGTATGACAATGAATAAAAGCACTGGCCTCACCCCTGACGGTGCGGCACTTCTAAGCTTTAGGATGGCAGTTGCCAGTTCTGATGGAGTCATCTTCCAGTGGAGACCTGAGGATCCAAACCCTTGTAACTGGACAGGAGTGGTCTGCGATCCAAAAACGAAGAGAGTAATCTCATTGAAGCTTGCAAGTCACAAACTGAGTGGGTTCATTGCACCTGAACTTGGGAAGTTAGACCAATTGAAGACCCTGACTCTTTCGGACAACAACCTATATGGAACAATACCATCAGAACTGGGAAATTGCTCGCAGTTGCAGGGAATGTTCTTGCAAAGAAACTACCTAAGTGGAGCGATTCCCTATGAGCTGGGAAACCTTTCAGAGTTGGAAATGTTAGACGTTTCTAGCAACTCCCTTAGTGGAAATATCCCAACGTCCCTTGGGAATTTGGATAAGCTGGCTATTCTCAATGTTTCATCAAATTTTTTAATTGGACCAGTACCTTCTGATGGTGTTCTTTCCAAGTTTTCAGAGACTTCCTTCGTCGGAAATCGTGGTTTGTGTGGGAAACAAGTTAGCGTCATCTGCAAAGACGATAATACTGGATCTGGAACAAATCCTGAGTACCCAAGCTCAGCCCAAAATCAAATGAGGAGGAAGTATTCTGGCCGGCTGCTCATAAGTGCATCAGCAACAGTGGGTGCACTACTACTTGTTGCTCTTATGTGTTTCTGGGGTTGCTTTCTTTACAAAAGATTTGGCAAAAATGACAAGAAAGGTCTTGTGAAGGATGTTGGTGGAGGTGCATCCGTTGTGATGTTTCATGGAGACTTGCCATACTCTTCCAAAGACATCATGAAGAAGTTGGAAACCTTGAATGAGGAACACATAATCGGTTCTGGGGGTTTTGGAACGGTTTACAGGCTTGCAATGGATGATGGCAATGTATTTGCTTTGAAAAATATTGTAAAGATAAATGAGGGGTTTGATCACTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGTTTGAAGCATCGGTACCTTGTTAATTTGAGAGGATATTGCAACTCTCCCACATCAAAACTGTTGATTTATGATTATCTATCTGGGGGAAGCCTTGACGAGGCCCTTCATGAAAGATCTGAGCAATTAGATTGGGACACACGCTTGAATATTATATTGGGAGCAGCAAAAGGGCTTGCTTATTTGCACCATGATTGTTCACCCAGAATCATACATCGGGATATCAAGTCAAGCAACATTTTGCTCGATGGCAATCTGGATGCTCGAGTTTCTGACTTTGGACTTGCCAAGCTTCTGGATGACGATAAATCTCACATTACAACCATTGTTGCTGGAACATTTGGTTATTTGGCCCCCGAATATATGCAAAGTGGTAGGGCAACTGAAAAGACTGATGTATATAGTTTTGGAGTTCTGGTACTTGAAGTACTGAGTGGAAAACGACCTACGGATGCATCATTTATTGAGAAAGGCCTGAACATTGTTGGCTGGTTAAATTTTCTTGTCACGGAGAATAGGCAACGAGAAATAGTTGATCCACAATGTGAAGGAGTACAGTCAGAAACTCTTGACGCATTGCTAAGGCTTGCTATTCAGTGTGTTTCTTCTAGTCCAGATGATCGACCGACTATGCACCGAGTAGTCCAGTTCTTTGAATCCGAGGTTATGACTCCATGCCCAAGTGACTTCGATGATTCCAATTCTGATTAA 2370 43.84 MGQSVTRLKTSLFARATAPLQSHSNASLSNIPHALRLSPSLSLYLSLSLEASSKLSLSVIDRFCQTSHGPTIFFLSSTFLSFTHLHFSPIGSKIVLQLLGYSDTILDWTGLDWIVIVLFCFFWFEQLRVESGCSSGALLHLLNTMIFKSCLAEEESLNDLSSASTTVPHVQGNLWSACSVRWFIVDTSPLTRATMGICLVKCSGLLVLHVLLLCMTMNKSTGLTPDGAALLSFRMAVASSDGVIFQWRPEDPNPCNWTGVVCDPKTKRVISLKLASHKLSGFIAPELGKLDQLKTLTLSDNNLYGTIPSELGNCSQLQGMFLQRNYLSGAIPYELGNLSELEMLDVSSNSLSGNIPTSLGNLDKLAILNVSSNFLIGPVPSDGVLSKFSETSFVGNRGLCGKQVSVICKDDNTGSGTNPEYPSSAQNQMRRKYSGRLLISASATVGALLLVALMCFWGCFLYKRFGKNDKKGLVKDVGGGASVVMFHGDLPYSSKDIMKKLETLNEEHIIGSGGFGTVYRLAMDDGNVFALKNIVKINEGFDHFFERELEILGSLKHRYLVNLRGYCNSPTSKLLIYDYLSGGSLDEALHERSEQLDWDTRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLDDDKSHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDPQCEGVQSETLDALLRLAIQCVSSSPDDRPTMHRVVQFFESEVMTPCPSDFDDSNSD 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27777961 27790945 + CePI673135_07g012280.1 Cec07g1228 208007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1228 789 Gene3D Transferase(Phosphotransferase) domain 1 580 778 - -
Cec07g1228 789 Pfam Protein kinase domain 506 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1228 789 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 355 773 IPR050647 -
Cec07g1228 789 SMART serkin_6 504 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1228 789 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 580 782 - -
Cec07g1228 789 Gene3D Phosphorylase Kinase; domain 1 480 579 - -
Cec07g1228 789 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524(InterPro)
Cec07g1228 789 Gene3D Ribonuclease Inhibitor 224 410 IPR032675 -
Cec07g1228 789 SUPERFAMILY Protein kinase-like (PK-like) 488 771 IPR011009 -
Cec07g1228 789 SUPERFAMILY L domain-like 224 387 - -
Cec07g1228 789 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515(InterPro)
Cec07g1228 789 ProSiteProfiles Protein kinase domain profile. 504 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1228 789 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 478 579 - -
Cec07g1228 789 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 223 385 - -
Cec07g1228 789 Pfam Leucine rich repeat N-terminal domain 225 263 IPR013210 -
Cec07g1228 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1834 Cec-Chr6:31757981 Cec07g1228 Cec-Chr7:27777961 1.70E-128 dispersed
Cec07g1228 Cec-Chr7:27777961 Cec11g1677 Cec-Chr11:31039582 4.70E-219 dispersed
Cec07g1228 Cec-Chr7:27777961 Cec01g1526 Cec-Chr1:29863629 5.50E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72141 PF00069 Pkinase 4.60E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1228 - - - 0.0