Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1249 | ATGGCTAATCGGGGAGGAGGGTCATTTTTACCCTCAAATATTCCGCCTCAAGGTTGGGCAGGAGATGAACTTTACGCTGAGCTATGGAGAGTCTCGGCTGGGCCTCTTGTGGAAATTCCTCGAGTTAATGAGAAGGTTCTTTATTTTCCTCAAGGCCACATGGAACAGTTGGAGGCATCTACAAATCAGGAGCTAAATCAGAAACTTCCTTTATTTAATCTTTCCTCCAAAATTCTCTGTCAAGTAGTTGATACCCGGCTGCTGGCAGAGCAGGACAGTGATGAGGTTTATGCACAGATAACTTTAATGCCAGAAGCAAATCAAGAGTTACCTACGAGTCTTGAACCTTCACCCCCAGAGTGTCGAAAACCGAAAGTCCATTCGTTTTGCAAGGTTTTAACTGCTTCTGATACTAGCACCCATGGGGGGTTCTCCGTGCTCCGGAAACATGCCACCGAATGCCTGCCTCCATTAGATATGACCCAGCAGACCCCAACTCAGGAACTCGTAGCCAAAGATCTTCATGGTTTCGAGTGGCGATTCAAGCATATATTTAGGGGTCAACCACGACGGCATTTGCTGACGACCGGATGGAGCACCTTTGTTACTTCTAAGAGACTAGTTGCTGGAGATTCTTTTGTGTTCTTGAGGGGGGAAAATGGGGAATTGCGAGTTGGAGTGAGGCGTCTTGCTCGCCAACAGAGCAGCATGCCTTCATCTGTGATTTCAAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCAACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTCAGCTTGAATAAGTACATAGAAGCGATGAACTATAAGTTCTCAGTTGGGATGAGGTTCAAGATGAGGTTTGAGGGAGAGGAGTCTCCAGAGAGGAGGTTTTCGGGTACCATAGTTGGAGTTGACGACATGTCTCCTCACTGGACCAATTCAGACTGGCGATCACTGAGAATTCAATGGGATGAACTTGCATCTATTCAGAGACCTGATAGAGTTTCACCATGGGAGATTGAACCTTTCGTGGCTCCTACGTCCCCAAGCATTCCGCACTCTATTTCCATAAAGAATAAAAGGCCTCGGCCTCCACTTGAAATTCTAGATTCTGATAATTCAACTGTAACAACTCTAAGACATCCAGGATCATCTCAATCACATGATGATAGAACACAGCTGAGTGTTGCTGCTGCCGAAATTAAAAGATTTGAAAATCATGCAACATGGCATTACAAGCAAACGGATGTTAGCAGCAATGGGAATTCTGTATCAAGGAGTCCGATGGAGGGCTCTTGGTTAACTTCTCCGAATGGGAGTGTTTCTCAGCATCGGTTACAGGAATTGACAGATGACCGTAAGAGCAGTTCTGTTTGGTCAACGGTCTTTCCAGGAGTCCTGGCATCAAACTCGACATGTCCAACTCCACGCCCATCAAATCCAAAGAGTGACCAAGTACATGACCTTGGGGAAAAGGGGAGGAAAACTGAAGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGAGCTCATCAATCATTCTAAGAGCCCAGTTCCTCCTGAAAGGGTGCCCGATCAACCAATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAAGCCTGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACCAGCAGCCGAAGCCGTACTAAGGTACAAATGCAGGGGATGGCCGTTGGACGTGCGGTAGACCTTACCACATTGGAGGGGTATGGCCAACTCATTGATGAACTAGAAAAGATGTTTGATATCAAGGGAGAACTCCGCCCTCGTAATAAGTGGGAGATCGTCTTCACTGACGATGAAGGAGATACGATGCTCATGGGCGACTACCCATGGCAGGAATTCTGTAACATGGTGAGAAGAATATACATATGGTCAAGTCAGGATGTGAAGATGAGTTCGGGTAGCAAACTTGCGATGTCTACAATTGAATGTGACGGGACTGTAATAACCTCGGAGTCAGCCGACAGCTGA | 2094 | 46.61 | MANRGGGSFLPSNIPPQGWAGDELYAELWRVSAGPLVEIPRVNEKVLYFPQGHMEQLEASTNQELNQKLPLFNLSSKILCQVVDTRLLAEQDSDEVYAQITLMPEANQELPTSLEPSPPECRKPKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLNKYIEAMNYKFSVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWTNSDWRSLRIQWDELASIQRPDRVSPWEIEPFVAPTSPSIPHSISIKNKRPRPPLEILDSDNSTVTTLRHPGSSQSHDDRTQLSVAAAEIKRFENHATWHYKQTDVSSNGNSVSRSPMEGSWLTSPNGSVSQHRLQELTDDRKSSSVWSTVFPGVLASNSTCPTPRPSNPKSDQVHDLGEKGRKTEVAPSCRLFGIELINHSKSPVPPERVPDQPISAPNEITDAEQNSSLPKASKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMSSGSKLAMSTIECDGTVITSESADS | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28004971 | 28008586 | - | CePI673135_07g012490.1 | Cec07g1249 | 208028 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 482 | 496 | - | - | |
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 365 | 384 | - | - | |
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 574 | 590 | - | - | |
Cec07g1249 | 697 | FunFam | Auxin response factor | 127 | 231 | - | - | |
Cec07g1249 | 697 | Pfam | Auxin response factor | 255 | 333 | IPR010525 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Cec07g1249 | 697 | CDD | B3_DNA | 127 | 229 | IPR003340 | GO:0003677(InterPro) | |
Cec07g1249 | 697 | SUPERFAMILY | DNA-binding pseudobarrel domain | 116 | 258 | IPR015300 | - | |
Cec07g1249 | 697 | SUPERFAMILY | CAD & PB1 domains | 580 | 662 | - | - | |
Cec07g1249 | 697 | Gene3D | - | 581 | 673 | - | - | |
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 527 | 590 | - | - | |
Cec07g1249 | 697 | Gene3D | - | 126 | 230 | IPR015300 | - | |
Cec07g1249 | 697 | SMART | B3_2 | 129 | 231 | IPR003340 | GO:0003677(InterPro) | |
Cec07g1249 | 697 | FunFam | Auxin response factor | 290 | 361 | - | - | |
Cec07g1249 | 697 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 23 | 673 | IPR044835 | GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Cec07g1249 | 697 | Gene3D | - | 290 | 361 | - | - | |
Cec07g1249 | 697 | ProSiteProfiles | PB1 domain profile. | 586 | 667 | IPR053793 | - | |
Cec07g1249 | 697 | Pfam | B3 DNA binding domain | 129 | 229 | IPR003340 | GO:0003677(InterPro) | |
Cec07g1249 | 697 | Pfam | AUX/IAA family | 633 | 669 | IPR033389 | - | |
Cec07g1249 | 697 | Pfam | AUX/IAA family | 576 | 622 | IPR033389 | - | |
Cec07g1249 | 697 | ProSiteProfiles | B3 DNA-binding domain profile. | 129 | 231 | IPR003340 | GO:0003677(InterPro) | |
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 429 | 457 | - | - | |
Cec07g1249 | 697 | MobiDBLite | consensus disorder prediction | 482 | 511 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0176 | Cec-Chr1:1705659 | Cec07g1249 | Cec-Chr7:28004971 | 1.80E-221 | dispersed | |
Cec07g1249 | Cec-Chr7:28004971 | Cec11g0032 | Cec-Chr11:438194 | 7.00E-174 | dispersed | |
Cec07g1249 | Cec-Chr7:28004971 | Cec09g0941 | Cec-Chr9:8919860 | 2.30E-209 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29944 | PF02362 | B3 | 8.00E-22 | CL0405 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1249 | K14486 | - | csv:101213942 | 1240.33 |