Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1305 ATGGCCCAAAAGGTTTGTGCTCACCAAAATGGTTCAATGGAGAACTTGTGCAGCACCCATCAGGATCCACTCAACTGGGGTGTGGCCGCTGACTCCGTGAAGGGAAGTCATCTAGATGAGGTCAAGCGGATGGTGGAAGAGTATCGGACACCTTTCGTGAAGCTTGGAGGCCAAACTCTCACCATTTCTCAAGTCGCTGCCATTGCCACTCATGACAACGATGTCATCGTAGAATTGGCCGAGTCTGCAAGGGCCGGTGTAAAAGCCAGCAGCGATTGGGTAATGGAGAGCATGAGCAAAGGCACGGATAGTTATGGTGTTACTACTGGCTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATCCGATTCTTGAATTCCGGTATCTTTGGGACCGGCAGTGAGTCGAGTCACACTTTGCCTCATTCTGCCACAAGGGCGGCCATGTTGGTGAGAATCAACACACTCCTACAAGGCTACTCCGGCATTAGATTCGAGATTTTGGAAGCCATTGCTAATCTCTTGAACCACAACGTTACTCCGTGTTTGCCACTTCGAGGAACAATTACAGCTTCTGGAGATTTGGTTCCTTTGTCTTATATTGCAGGGTTGCTCACCGGTCGCCACAATTCAAAAGCGATCGGACCCAATGGAGAACCTCTTGATGCAAAGGCTGCTTTTGAACAAGCTGGCATTGATTCTGGGTTCTTTGAGTTGCAACCTAAGGAAGGTCTTGCTCTTGTAAATGGCACTGCTGTCGGTTCTGGGTTGGCCTCCATTGTTCTCTTCGAGGCAAATATTTTGGCTGTTTTGTCTGAAATTCTATCTGCCATTTTTGCTGAGGTGATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCACCCTGGCCAAATTGAAGCTGCTGCAATCATGGAGCACATTTTAGATGGAAGCTCCTACATGAAAACTGCTAAGAAACTGCATGAAATGGATCCTCTCCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACTTCTCCTCAATGGTTGGGTCCCTTGATTGAAGTGATCCGTTTCTCCACCAAGTCGATCGAGCGGGAAATTAATTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCGTTGCATGGAGGTAACTTCCAAGGAACGCCAATTGGAGTTTCCATGGACAACACCCGTTTGGCCATTGCATCGATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTCGTCAATGATTTCTACAATAACGGTTTGCCTTCCAATCTTTCTGCAAGTAGAAACCCCAGCTTGGATTATGGGTTCAAAGGTGCTGAGATTGCCATGGCCTCATACTGCTCTGAGCTCCAATATCTTGCAAATCCAGTGACGAGTCATGTCCAGAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACCGCTGAAGCCATCGATATCCTCAAACTCATGTCTTCCACATTTTTAGTTGCTCTTTGTCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCACAGTGAAAAACACAGTCAGCCAAGTAGCGAAAAAGGTGTTGACTACATCCTCCAATGGCGCACTTCACCCATCAAGATTTTGTGAGAAAGATCTACTCAAAGTTGTTGACCGAGAATACACTTTTGCATACATCGATGATCCATGCAGTGCTACTTACCCACTTATGCAAAAGTTGAGGCAAGTTCTTGTTGAGCATGCACTTGAAAATGGCGATAACGAAGTCAACGCAAACACTTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAATTAAAGGCAATCTTACCGAAGGAGGTTGAAAATGTAAGGATTGCACATGAGAGTGGGAACTCTAAAATTGAAAATCAAATCAAGGATTGCAGATCTTACCCATTATACAGATTTGTGAGAGAGGAGTTGGGAACAAGCTTGCTAACTGGCGAAAAGGTGATATCTCCTGGAGAAGAGTGTGAGAAGGTATTCACGGCTTTATGTCAAGGAAAAATGATCGACTCTATCTTCGAATGCTTGAAGGAGTGGAATGGAGCACCAATCCCTATTTGCTAA 2142 45.1 MAQKVCAHQNGSMENLCSTHQDPLNWGVAADSVKGSHLDEVKRMVEEYRTPFVKLGGQTLTISQVAAIATHDNDVIVELAESARAGVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGTGSESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIANLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGEPLDAKAAFEQAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVLVEHALENGDNEVNANTSIFQKIGAFEEELKAILPKEVENVRIAHESGNSKIENQIKDCRSYPLYRFVREELGTSLLTGEKVISPGEECEKVFTALCQGKMIDSIFECLKEWNGAPIPIC 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28583221 28585362 - CePI673135_07g013050.1 Cec07g1305 208084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1305 713 CDD PAL-HAL 58 523 IPR001106 -
Cec07g1305 713 PANTHER HISTIDINE AMMONIA-LYASE 16 713 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cec07g1305 713 Pfam Aromatic amino acid lyase 60 538 IPR001106 -
Cec07g1305 713 NCBIfam phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cec07g1305 713 FunFam Phenylalanine ammonia-lyase 13 259 - -
Cec07g1305 713 Gene3D - 13 259 IPR024083 -
Cec07g1305 713 SUPERFAMILY L-aspartase-like 22 713 IPR008948 GO:0003824(InterPro)
Cec07g1305 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841(InterPro)
Cec07g1305 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Cec07g1305 713 Gene3D - 526 647 IPR023144 -
Cec07g1305 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Cec07g1305 713 FunFam Phenylalanine ammonia-lyase 260 564 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1053 Cec-Chr4:30098872 Cec07g1305 Cec-Chr7:28583221 0.00E+00 dispersed
Cec04g1054 Cec-Chr4:30103131 Cec07g1305 Cec-Chr7:28583221 0.00E+00 dispersed
Cec04g1055 Cec-Chr4:30108094 Cec07g1305 Cec-Chr7:28583221 0.00E+00 dispersed
Cec04g1056 Cec-Chr4:30112531 Cec07g1305 Cec-Chr7:28583221 8.20E-57 dispersed
Cec04g1057 Cec-Chr4:30113893 Cec07g1305 Cec-Chr7:28583221 0.00E+00 dispersed
Cec07g1305 Cec-Chr7:28583221 Cec07g1307 Cec-Chr7:28593523 0.00E+00 dispersed
Cec07g1305 Cec-Chr7:28583221 Cec07g1306 Cec-Chr7:28588741 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1305 K10775 - csv:101204574 1351.65