Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1307 | ATGGCTTCCAAAAATAATGATTCATTACACAGCTTCTGCACCAGCGGTCAGGATCCACTCAACTGGGGTGTGGCCGCTGACTCCGTGAAGGGAAGTCATCTGGATGAGGTCAAGCGGATGGTGGAAGAGTATCGGACACCTTTCATGAAGCTTGGAGGCCAAACTCTCACCATTTCTCAAGTCGCTGCCATTGCCACTCGTGACAACGATGTCATCGTAGAATTGGCCGAGTCTGCGAGGGCCGGTGTAAAAGCCAGCAGCGATTGGGTAATGGAGAGCATGAGCAAAGGCACGGATAGTTATGGTGTTACTACTGGCTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATCCGATTCTTGAATTCCGGTATCTTTGGGACCGGCAGTGAGTCGAGTCACACTTTGCCTCATTCTGCCACAAGGGCGGCCATGTTGGTGAGAATCAACACACTCCTACAAGGCTACTCCGGCATTAGATTCGAGATTTTGGAAGCCATTGCTAATCTCTTGAACCACAACGTTACTCCGTGTTTGCCACTTCGAGGAACAATTACAGCTTCTGGAGATTTGGTTCCTTTGTCTTATATTGCAGGGTTGCTCACCGGTCGCCACAATTCAAAAGCGATCGGACCCAATGGAGAACCTCTTGATGCAAAGGCTGCTTTTGAACAAGCTGGCATTGATTCTGGGTTCTTTGAGTTGCAACCTAAGGAAGGTCTTGCTCTTGTAAATGGCACTGCTGTCGGTTCTGGGTTGGCCTCCATTGTTCTCTTCGAGGCAAATATTTTGGCTGTTTTGTCTGAAATTCTATCTGCCATTTTTGCTGAGGTGATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCACCCTGGCCAAATTGAAGCTGCTGCAATCATGGAGCACATTTTAGATGGAAGCTCCTACATGAAAACTGCTAAGAAACTGCATGAAATGGATCCTCTCCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACTTCTCCTCAATGGTTGGGTCCCTTGATTGAAGTGATCCGTTTCTCCACCAAGTCGATCGAGCGGGAAATTAATTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCGTTGCATGGAGGTAACTTCCAAGGAACGCCAATTGGAGTTTCCATGGACAACACCCGTTTGGCCATTGCATCGATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTCGTCAATGATTTCTACAATAACGGTTTGCCTTCCAATCTTTCTGCAAGTAGAAACCCCAGCTTGGATTATGGGTTCAAAGGTGCTGAGATTGCCATGGCCTCATACTGCTCTGAGCTCCAATATCTTGCAAATCCAGTGACGAGTCATGTCCAGAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACCGCTGAAGCCATCGATATCCTCAAACTCATGTCTTCCACATTTTTAGTTGCTCTTTGTCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCACAGTGAAAAACACAGTCAGCCAAGTAGCGAAAAAGGTGTTGACTACATCTTCCAATGGCGCACTTCACCCATCAAGATTTTGTGAGAAAGATCTACTCAAAGTTGTTGACCGAGAATACACTTTTGCATACATCGATGATCCATGCAGTGCTACTTACCCACTTATGCAAAAGTTGAGGCAAGTTCTTGTTGAGCATGCACTTGAAAATGGCGATAACGAAGTCAACGCAAACACTTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAATTAAAGGCAATCTTACCGAAGGAGGTTGAAAATGTAAGGATTGCACATGAGAGTGGGAACTCTAAAATTGAAAATCAAATCAAGGATTGCAGATCTTACCCATTATACAGATTTGTGAGAGAGGAGTTGGGAACAAGCTTGCTAACTGGCGAAAAGGTGATATCTCCTGGAGAAGAGTGTGAGAAGGTATTCACGGCTTTATGTCAAGGAAAAATGATCGACTCTATCTTCGAATGCTTGAAGGAGTGGAATGGAGCACCAATCCCTATTTGCTAA | 2130 | 45.02 | MASKNNDSLHSFCTSGQDPLNWGVAADSVKGSHLDEVKRMVEEYRTPFMKLGGQTLTISQVAAIATRDNDVIVELAESARAGVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGTGSESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIANLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGEPLDAKAAFEQAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVLVEHALENGDNEVNANTSIFQKIGAFEEELKAILPKEVENVRIAHESGNSKIENQIKDCRSYPLYRFVREELGTSLLTGEKVISPGEECEKVFTALCQGKMIDSIFECLKEWNGAPIPIC | 709 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28593523 | 28595652 | + | CePI673135_07g013070.1 | Cec07g1307 | 208086 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1307 | 709 | Gene3D | - | 522 | 643 | IPR023144 | - | |
Cec07g1307 | 709 | Pfam | Aromatic amino acid lyase | 56 | 534 | IPR001106 | - | |
Cec07g1307 | 709 | FunFam | Phenylalanine ammonia-lyase | 9 | 255 | - | - | |
Cec07g1307 | 709 | CDD | PAL-HAL | 54 | 519 | IPR001106 | - | |
Cec07g1307 | 709 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 191 | 207 | IPR022313 | GO:0016841(InterPro) | |
Cec07g1307 | 709 | Gene3D | Fumarase/aspartase (Central domain) | 256 | 704 | - | - | |
Cec07g1307 | 709 | SUPERFAMILY | L-aspartase-like | 18 | 709 | IPR008948 | GO:0003824(InterPro) | |
Cec07g1307 | 709 | FunFam | Phenylalanine ammonia-lyase | 256 | 560 | - | - | |
Cec07g1307 | 709 | NCBIfam | phenylalanine ammonia-lyase | 18 | 699 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) | |
Cec07g1307 | 709 | Gene3D | - | 10 | 255 | IPR024083 | - | |
Cec07g1307 | 709 | PANTHER | HISTIDINE AMMONIA-LYASE | 15 | 709 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Cec07g1307 | 709 | FunFam | Phenylalanine ammonia-lyase | 522 | 643 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1305 | Cec-Chr7:28583221 | Cec07g1307 | Cec-Chr7:28593523 | 0.00E+00 | dispersed | |
Cec07g1307 | Cec-Chr7:28593523 | Cec08g0790 | Cec-Chr8:19735758 | 0.00E+00 | dispersed | |
Cec07g1306 | Cec-Chr7:28588741 | Cec07g1307 | Cec-Chr7:28593523 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1307 | K10775 | - | csv:116401606 | 1328.15 |