Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1329 ATGGACACAGAGGAAGCTCCATCGACACCGGTGACGCCGGGGACTCCCGGGGCTCCGCTGTTTGGACGAGTGAAGGATAATCAGCATGGAAGTGAGAATGGTAAAAGATCTCTTCTCAAAAGCTGCATATCTTTCAATGTTGATGATAATTGGGGCAGTGAAGAAGGAGGCTTATCTAAACTAGTCTCGTCTTGTTCATTGCCATACCCTCCTGTCTCACTTGCAAGAAAGGTGGGAGCGGAGTTCATAGGTACTTCGATACTCATCTTTGCCGGAACCGCCACGGCCATCGTGAACCAAAAGACGAAAGGAACCGAAACACTGATTGGACTGGCGGCCTCCACCGGCCTTGCGGTGATGATTGTGATCTTGTCAACGGGTCACATCTCTGGAGCCCATCTGAATCCGGCCATCACCATTGCTTTTGCTGCGTTGAAGCAGTTTCCATGGAAGCATGTGCCAATGTATATTGGAGCTCAAATGGTGGCTTCTTTGTGTTCTTCTTTTGCATTGAAATGGATTTTTGATCCCATAACGGGAGGAGGAGCTACTGTTCCTTCATGTGGAAATGCCCAAGCTTTTGCTCTTGAGTTTATCATTAGCTTCAACCTCATGTTCGTCATCACTGCTGTCGCTACTGACACTCGGGCTGTGGGAGAATTGGCGGGAATCGCGGTAGGAGCAACCGTTATGCTCAATGTACTCATCGCCGGACAAACAACTGGAGCTTCAATGAATCCAGTAAGAACACTGGGGCCAGCCATTGCTGCAAACAACTTTAGAGCCATTTGGATTTACCTCACAGCTCCCATACTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAGTTAAGTTGCCCGACAAAGATGGCAATTCACGCTTGCCTTCTACTGCAGGAAGCTTTCGAGGATGA 915 48.85 MDTEEAPSTPVTPGTPGAPLFGRVKDNQHGSENGKRSLLKSCISFNVDDNWGSEEGGLSKLVSSCSLPYPPVSLARKVGAEFIGTSILIFAGTATAIVNQKTKGTETLIGLAASTGLAVMIVILSTGHISGAHLNPAITIAFAALKQFPWKHVPMYIGAQMVASLCSSFALKWIFDPITGGGATVPSCGNAQAFALEFIISFNLMFVITAVATDTRAVGELAGIAVGATVMLNVLIAGQTTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAVKLPDKDGNSRLPSTAGSFRG 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28889350 28893423 + CePI673135_07g013290.1 Cec07g1329 208108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1329 304 Gene3D Glycerol uptake facilitator protein. 69 293 IPR023271 -
Cec07g1329 304 MobiDBLite consensus disorder prediction 1 33 - -
Cec07g1329 304 Pfam Major intrinsic protein 73 281 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PANTHER AQUAPORIN NIP2-1 68 289 IPR034294 -
Cec07g1329 304 FunFam Aquaporin NIP2-1 65 295 - -
Cec07g1329 304 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Cec07g1329 304 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1329 304 SUPERFAMILY Aquaporin-like 72 290 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0115 Cec-Chr1:990403 Cec07g1329 Cec-Chr7:28889350 1.20E-87 dispersed
Cec01g0116 Cec-Chr1:998441 Cec07g1329 Cec-Chr7:28889350 1.40E-79 dispersed
Cec07g1329 Cec-Chr7:28889350 Cec10g1518 Cec-Chr10:29650893 1.40E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1329 K09874 - csv:101207376 572.778