Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1332 ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGCTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCTAATTCTCAACTGGGTTTGGATCTGAGCCTTTCTAATAAAGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTATTTCGATGTGAATTTAACAACAGAACCTACAGATACAGAAACAGAGCCCAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGGGGACACCAAAATGCCCACAAGCGAGAGAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTCGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTCAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTTCTCTTCATGTTTCTGCAATTGGGTCATCTGGAATTTATGGTCACAGTGGATGGTCAAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTTAGAGGCATTTCGTCGAACACTGGAGCTGCAAGGTTTCAGGGTGTGAAGAAATTCTCTCCGGCGACAGACACGGAGGCGCCACCGCCGCTCGGAGGGTTCTGGTGGGATGGCGGCGGTGGTGGTGGATTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA 801 47.69 MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNKDSDHGSNPELNLIDYFDVNLTTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFQGVKKFSPATDTEAPPPLGGFWWDGGGGGGFSHLKMKPKQDELLKLDLSLKL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28932093 28932893 + CePI673135_07g013320.1 Cec07g1332 208111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1332 266 MobiDBLite consensus disorder prediction 1 37 - -
Cec07g1332 266 FunFam Zinc finger protein 2 67 131 - -
Cec07g1332 266 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Cec07g1332 266 Gene3D Classic Zinc Finger 65 130 - -
Cec07g1332 266 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 266 IPR044246 GO:0009788(InterPro)
Cec07g1332 266 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Cec07g1332 266 MobiDBLite consensus disorder prediction 8 22 - -
Cec07g1332 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1212 Cec-Chr5:11150672 Cec07g1332 Cec-Chr7:28932093 4.10E-21 dispersed
Cec05g1820 Cec-Chr5:30159542 Cec07g1332 Cec-Chr7:28932093 3.30E-23 dispersed
Cec07g1332 Cec-Chr7:28932093 Cec08g1406 Cec-Chr8:25868414 1.60E-30 dispersed
Cec01g0677 Cec-Chr1:7458791 Cec07g1332 Cec-Chr7:28932093 2.60E-24 transposed
Cec05g1225 Cec-Chr5:11360210 Cec07g1332 Cec-Chr7:28932093 6.10E-25 transposed
Cec07g0215 Cec-Chr7:2166230 Cec07g1332 Cec-Chr7:28932093 9.30E-11 transposed
Cec10g1655 Cec-Chr10:31034066 Cec07g1332 Cec-Chr7:28932093 5.00E-14 transposed
Cec11g0115 Cec-Chr11:1395824 Cec07g1332 Cec-Chr7:28932093 7.30E-19 transposed
Cec11g1355 Cec-Chr11:27802045 Cec07g1332 Cec-Chr7:28932093 5.70E-19 transposed
Cec06g1524 Cec-Chr6:28749434 Cec07g1332 Cec-Chr7:28932093 3.80E-13 transposed
Cec07g1332 Cec-Chr7:28932093 Cec09g0325 Cec-Chr9:2698485 1.20E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29950 None None None None Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1332 - - - 0.0