Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1364 ATGGCCCTTCGCCCTTTCTTCTGCTGTGGACTTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCGTTGAAGGAATTACACTCGGCCACAAATAATTTTAATTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTACTGGGGTCAGCTGTGGGATGGATCACAAATAGCAGTTAAAAGGTTGAAGGTCTGGAGCAACAAAGCAGACATGGAATTCTCTGTGGAAGTTGAAATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCTGAAGGGCAAGAGCGCTTGATCGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCACCTTGATTGGAAACGTCGTATGAAAATCGCTATTGGGTCTGCCGAGGGAATTGCCTATCTTCACCACCAAGCAACTCCACATATCATTCATCGAGACATCAAAGCTAGTAATGTTTTGCTGGATCCAGATTTCCAAGCTCGAGTAGCTGACTTTGGATTTGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTCGCTCCTGAATATGCCATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGCTTTGGCATTCTCCTGCTTGAGCTTGCTACCGGCAAGAAGCCTCTTGAGAAATTGAGTGCAACAATGAAACGCACAATCATAGATTGGGCACTACCGATTGTAGTTGAGAAAAAAATTGACGAACTTGCAGACCCGAAGCTAAATGGAGACTATAACGCAGATGAACTAAAGAGAGTTGTCCTTGTTGCGCTCTGTTGTTCCCATTCACGACCTGAGAAACGACCGACCATGCTCGAGGTGGTTGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTAGCCAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCACAAACTACAGAAATACAAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGGATTCAAAAGAGAAGGAGAAAGAGAATTCATCACAAAACCCCACATGA 1110 44.41 MALRPFFCCGLGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECHLDWKRRMKIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTIIDWALPIVVEKKIDELADPKLNGDYNADELKRVVLVALCCSHSRPEKRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAAQTTEIQAGEDSSDFISEEKDSKEKEKENSSQNPT 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29242073 29245047 - CePI673135_07g013640.1 Cec07g1364 208143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1364 369 PANTHER OS01G0750732 PROTEIN 22 349 IPR050885 -
Cec07g1364 369 CDD STKc_IRAK 46 313 - -
Cec07g1364 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Cec07g1364 369 SUPERFAMILY Protein kinase-like (PK-like) 23 311 IPR011009 -
Cec07g1364 369 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Cec07g1364 369 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Cec07g1364 369 SMART serkin_6 40 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1364 369 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1364 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1364 369 MobiDBLite consensus disorder prediction 336 369 - -
Cec07g1364 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524(InterPro)
Cec07g1364 369 Coils Coil 305 325 - -
Cec07g1364 369 MobiDBLite consensus disorder prediction 347 369 - -
Cec07g1364 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Cec07g1364 369 Pfam Protein kinase domain 41 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0922 Cec-Chr5:8040270 Cec07g1364 Cec-Chr7:29242073 5.10E-115 dispersed
Cec07g1364 Cec-Chr7:29242073 Cec11g0254 Cec-Chr11:2691823 2.20E-78 dispersed
Cec03g0402 Cec-Chr3:4411811 Cec07g1364 Cec-Chr7:29242073 9.40E-55 transposed
Cec06g1496 Cec-Chr6:28524751 Cec07g1364 Cec-Chr7:29242073 3.50E-114 transposed
Cec06g1330 Cec-Chr6:26670479 Cec07g1364 Cec-Chr7:29242073 2.10E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72143 PF00069 Pkinase 7.10E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1364 - - - 0.0