Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1406 ATGGAGAATCTAAGGGCTCCATTTAGGGGTATTGTGGGTGATATCAGAGGAAGAGCGGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGGATTGGAATTTTGGCCCCAACTGCTTACATTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTTGGTGAGCAATTGAGCCGAGATACAGATGGAAGCTTGAGCACAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCCATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGAGTTGCAGAACCTACAATTATTATGTATACTTATTTGTACAATTTTTGCAAGAAAAGGGAAGATATAGGGGGAGACCTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAACGCTTCCAGTCTAATCAACAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGCTAATCTCCGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCCCAGACCGAGAACACAAGTCTAGAGAAGTATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATCTTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCGTGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTGTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCGTTTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACAGTTGTCAAGGACATGGGGAAGATACCTCCTGCATACATCTTCATGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCATAGTGTCGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAATCCTCCTGCTTACCACTATGACATCCTGTTGCTGGGATTTATGACATTGGTTTGTGGGTTAATCGGGCTTCCTCCTTCAAATGGGGTCTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTACTGCCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACATCAGTAGTCAAAGAACTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATGCAAATGTTACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTACTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGATGATACCAACATCAGTTCTCTGGGGGTACTTCGCGTATATGGCCATTGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCCTAGAAGGTTTTCATGCTTCCTTCGTGGAGTCTGTTCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATTTTCTCATTTGTTTTGGAGTGACTTGGATCCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATCAGACATCGCATCCTTCCCAAGCTACTCCAACCTCATTATTTGCAGGAGCTCGACGCGGTTGAGTACGAAGAACTAACCGGTACCTCAATTCTCTCGCTTAGCTTGTCTATCAAGGAAAAGAATACCACTCGTATGGTTGATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTTGATGAGTTGACAACTCATAGAGGGGAGTTGAAAGTTAGAACTAAAAGCTTCAATGAGGATAGACACAGTCAGATTCATCCTGACCAAGGCATTGGAAATGACAAATACTAA 2019 42.74 MENLRAPFRGIVGDIRGRAACYKQDWVDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKKREDIGGDLFLAWAGWVCVWTALLLFLLAIFNASSLINKFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPQTENTSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVVVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLHHWTVVKDMGKIPPAYIFMAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPPAYHYDILLLGFMTLVCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKRKASDSEIYCQMQAVFLEMESSPITTSVVKELEDLKEAVMKGESKDENANVTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPHYLQELDAVEYEELTGTSILSLSLSIKEKNTTRMVDNEDEVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNDKY 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29629289 29633403 - CePI673135_07g014060.1 Cec07g1406 208185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1406 672 PANTHER ANION EXCHANGE PROTEIN 4 643 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cec07g1406 672 Pfam HCO3- transporter integral membrane domain 196 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec07g1406 672 Pfam HCO3- transporter integral membrane domain 454 596 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec07g1406 672 Pfam HCO3- transporter integral membrane domain 7 189 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec07g1406 672 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0511 Cec-Chr1:5170315 Cec07g1406 Cec-Chr7:29629289 3.50E-298 transposed
Cec01g1461 Cec-Chr1:29254449 Cec07g1406 Cec-Chr7:29629289 2.10E-218 transposed
Cec10g1180 Cec-Chr10:25752664 Cec07g1406 Cec-Chr7:29629289 4.90E-215 transposed
Cec07g1406 Cec-Chr7:29629289 Cec08g1349 Cec-Chr8:25407628 1.10E-269 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1406 K24194 - csv:101210964 1223.76