Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1425 ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGCGGTGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAACACTCCACCTCCGGCTCCGCCATCTGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGAGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACCAACGCCGTGCTCTGCAGAGCGTTCGATCCAGCGGCGACAGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCGGTGGAGCTCGTGAAAATCCGTCTTCAATTACAGGACTTGGGTTCATCAAATCACACAGATCTGAGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCTTCCCATTGCTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGTTGTAGAAAATCCGGGCAAGAGACGTTGAGAACGATGCTGGTAGCCGGAGGACTCGCCGGCGTCGCCAGTTGGGTTTGTTGTTACCCGTTGGATGTAGTTAAAACCAGACTTCAAGCTCAATCGAAATTCACATTTCAAAAGTACAGTGGAATTGTGGATTGTTTCTACAAGAGCGTGAAAGAAGAAGGGTACAGTGTTTTATGGCGTGGATTAGGAACCGCCATAGCTAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAACTCAGTTTGAGATGTCTATCCAACAATGGAGGATTTCATGCTGAAAATACCATTTGA 930 50.32 MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAICVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNHTDLSSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFTFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29855530 29856612 + CePI673135_07g014250.1 Cec07g1425 208204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1425 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 298 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Cec07g1425 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Cec07g1425 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Cec07g1425 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Cec07g1425 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Cec07g1425 309 Gene3D Mitochondrial carrier domain 12 304 IPR023395 -
Cec07g1425 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085(InterPro)
Cec07g1425 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Cec07g1425 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Cec07g1425 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085(InterPro)
Cec07g1425 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Cec07g1425 309 Pfam Mitochondrial carrier protein 211 299 IPR018108 -
Cec07g1425 309 Pfam Mitochondrial carrier protein 11 87 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1425 Cec-Chr7:29855530 Cec09g1207 Cec-Chr9:12590371 1.90E-46 dispersed
Cec10g2227 Cec-Chr10:36656643 Cec07g1425 Cec-Chr7:29855530 1.60E-24 transposed
Cec07g1425 Cec-Chr7:29855530 Cec09g0212 Cec-Chr9:1839658 1.20E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1425 K15109 - csv:101222749 602.053