Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1431 ATGGGTGCCGACATGTCCAACAATAATAATACTAATCGCCTTGCTTTTACCAAAGACTTCTTCTCCTCTCCGGCTCTTTCTCTTACCCTTGCGGGGATTTTCCGTCGGGGTGAGGTGGCGGAGAAGGGAGATGTTGAGATGGAGGAGGTGGACGACGGTAGCGGTGGAGCGCGGAGAGATGATACGGCGGCGGAAGTTAGTAGCGAGAATTCGGGACCAGTGAGGTCGAGATCGGACGACGACGGTTTCGACGGCGGAGGAGCGCACGACGAGAATGAAGATGGGGTGGATCATGGGTGTCATGTAAAGAGAAGGAAGAAATATCATCGACATACAACCGAGCAGATCAGAGAAATGGAGGCGCTGTTTAAAGAGTCGCCACATCCAGATGAGAAGCAAAGGCAACAGCTTAGCAAGCGATTAGGACTTTCGCCAAGGCAGGTCAAGTTTTGGTTCCAAAATCGTCGAACTCAAATCAAAGCTATTCAAGAGCGGCATGAAAACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAATTAAAGGAATGAGAGAAATTTGTAGGAAAAAAGTTGGTTGTCCAAACTGTGGGACGGCCGAAGCCGGTGAAGACCACGTCGCTTTTACAACCACGGAGCAATTGCGTATTAAGAACGCCAAGCTCAAAGCCGAGGTTGAGAAACTACGAGCGGCACTGGGAAAATACCCACAAGCAGCGGCGTCTCCTTCATATTCATCAGGGAACGAGCAAGAGACGAGGAAGCGAAGCTGCTTAGATTTTTACACAAGAATTTTCGGGGTTGAAAAGTCAAGGATGATGGAGAAAGTTGATGAAGCTGTTGAAGAGCTTAAAACAATGGCTACCGCCGGCGACCCACTATGGGTCCGCAGCGTGGAGAGCGGAAGACAGATATTAAACTACGATGAGTACCTGAAAACCTTCCATTTCAACAATAATAATAATTCCAACACTCGTTCCCTCAAAACACACATTGAAGCCTCACGTGAGACTGCCCTTGTATTTATGGACCCCTCTAGGTTGGTTCAAAGCTTCATGGATGAGAATCAATGGAAGGAGATGTTTCCTTTCATGATCTCCAAGGCAGCTACAGTCGATGTTATTTGTAATGGAGAAGCTGCCAATTTGAATAATGGCGCAGTGCAATTGATGTTTGCAGAGGTGCAAATGCTTACACCATTAGTTCCCACAAGAGAAATGTATTTCATTCGCCATTGCAAGCAGCTCGATGCCGAACAATGGGCGATAGTCGATGTTTCGATTGAAAGCATTGAAGATAACAATAATATCGATGCATCGTTGGTAAAATACAGAAAACGTCCATCTGGTTGCATCATTAAGGATGAATCTAATGGTCATTGCAAGGTAACAATGGTGGAACATTTGGAATGTGAAAAAAACAAAGTTCACAACTTGTATAGAAACATAGTGAACAATGGCACTGCCTTTGGGGCAAGACATTGGATGGCAACTCTCCAACTCCAATGTGAACGCCTTGCTTTCTTCATGGCAACCAACATCCCCATGAAAGACTCAACTGGAGTTGCAACACTAGCTGGAAGAAAAAGCACATTAAAGTTGGCACAGAGAATGAGTTCAAGCTTCTCCCAAGCAATTGCAGCTTCAAGTTATCAAACATGGACCAAAGTTGTGGGGAAAACAGGGGAAGACATTAGGGTTTGTTCAAGGAAGAATCTTAGTGACCCTGGTGAGCCCATTGGAGTCATTTTGTGTGCAGTTTCTTCTCTTTGGTTGCCTCTTTCTCCCCATCTTCTCTTTGATTTTTTCAGAGATGAATCTCGTCGAAATCAGTGGGACGCCATGTTTGGTGGAGATAAAGTTAAGTCCATTGCAAATTTAGCTAAAGGACAGGATCGAGGCAACTCAGTTACCATTCAAACAATAGGATCAAAAGAGAGCAACAACATGTGGATCCTACAAGACAGCTCCACAAACTCATCGGAATCCATGGTGGTATACTCTGGAGTAGACATTAGCAGCATGCAGTCAGTGATGTCTGGTTGTGATTCCGGCAGCGTCGCCATCCTCCCTTCAGGCTTTTCAATTCTCCCCGACGGCGCCGACTCCCGGCCGCCCCTCCTCATCACTCGTCGTAAAGACGACAAAGATTCCGACAATCATGGCGGCGTTCTACTCACCGCGGCGGTCCAAATCCTCACCGATACGTCTCCCTCTGCAAAACCCACCATGGAATCCATTGAGTACGTTAAAAGCATCATTTGTTGTACGCTCAAAAATATTAGAACCAGCATGTGCTGTGAGGATGATTGA 2316 45.98 MGADMSNNNNTNRLAFTKDFFSSPALSLTLAGIFRRGEVAEKGDVEMEEVDDGSGGARRDDTAAEVSSENSGPVRSRSDDDGFDGGGAHDENEDGVDHGCHVKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREEIKGMREICRKKVGCPNCGTAEAGEDHVAFTTTEQLRIKNAKLKAEVEKLRAALGKYPQAAASPSYSSGNEQETRKRSCLDFYTRIFGVEKSRMMEKVDEAVEELKTMATAGDPLWVRSVESGRQILNYDEYLKTFHFNNNNNSNTRSLKTHIEASRETALVFMDPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEAANLNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIESIEDNNNIDASLVKYRKRPSGCIIKDESNGHCKVTMVEHLECEKNKVHNLYRNIVNNGTAFGARHWMATLQLQCERLAFFMATNIPMKDSTGVATLAGRKSTLKLAQRMSSSFSQAIAASSYQTWTKVVGKTGEDIRVCSRKNLSDPGEPIGVILCAVSSLWLPLSPHLLFDFFRDESRRNQWDAMFGGDKVKSIANLAKGQDRGNSVTIQTIGSKESNNMWILQDSSTNSSESMVVYSGVDISSMQSVMSGCDSGSVAILPSGFSILPDGADSRPPLLITRRKDDKDSDNHGGVLLTAAVQILTDTSPSAKPTMESIEYVKSIICCTLKNIRTSMCCEDD 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29884000 29892614 - CePI673135_07g014310.1 Cec07g1431 208210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1431 771 MobiDBLite consensus disorder prediction 39 65 - -
Cec07g1431 771 FunFam Homeobox-leucine zipper protein HDG1 89 178 - -
Cec07g1431 771 SUPERFAMILY Bet v1-like 270 507 - -
Cec07g1431 771 ProSitePatterns 'Homeobox' domain signature. 137 160 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cec07g1431 771 MobiDBLite consensus disorder prediction 39 112 - -
Cec07g1431 771 Coils Coil 161 188 - -
Cec07g1431 771 Gene3D - 277 505 IPR023393 -
Cec07g1431 771 SUPERFAMILY Bet v1-like 529 703 - -
Cec07g1431 771 Gene3D - 94 175 - -
Cec07g1431 771 SUPERFAMILY Homeodomain-like 93 163 IPR009057 -
Cec07g1431 771 Pfam START domain 279 506 IPR002913 GO:0008289(InterPro)
Cec07g1431 771 Coils Coil 213 233 - -
Cec07g1431 771 Pfam Homeodomain 105 160 IPR001356 GO:0003677(InterPro)
Cec07g1431 771 ProSiteProfiles 'Homeobox' domain profile. 102 162 IPR001356 GO:0003677(InterPro)
Cec07g1431 771 ProSiteProfiles START domain profile. 267 509 IPR002913 GO:0008289(InterPro)
Cec07g1431 771 SMART HOX_1 104 166 IPR001356 GO:0003677(InterPro)
Cec07g1431 771 MobiDBLite consensus disorder prediction 74 101 - -
Cec07g1431 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 92 768 IPR042160 -
Cec07g1431 771 CDD homeodomain 105 160 IPR001356 GO:0003677(InterPro)
Cec07g1431 771 FunFam Homeobox-leucine zipper protein GLABRA 2 276 505 - -
Cec07g1431 771 CDD START_ArGLABRA2_like 271 505 - -
Cec07g1431 771 SMART START_1 275 506 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1245 Cec-Chr5:11765641 Cec07g1431 Cec-Chr7:29884000 1.10E-15 dispersed
Cec06g0005 Cec-Chr6:119486 Cec07g1431 Cec-Chr7:29884000 8.40E-150 dispersed
Cec07g1431 Cec-Chr7:29884000 Cec09g1162 Cec-Chr9:11617178 2.40E-122 dispersed
Cec07g1431 Cec-Chr7:29884000 Cec09g0197 Cec-Chr9:1760640 6.30E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29957 PF01852 START 9.80E-55 CL0209 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1431 K09338 - csv:101221341 1323.92