Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1441 | ATGGAAGTGCCCGAGTATCCTGTCGGTGGCTACTACGGCACCGGAGCCGGTGAATTTTCGCCGGAGAAGCAGAAATCTGCCGCCGAGCATTTCGCTGTCGATGAATATTTATTGGACTTCTCGAATGAAGATGTGGCAATGCATAGCGGTTTCTTCGATAACGTCGCCGGAAATTGCAGTGATTCGTCGACGGTTACTGCGATTGAGAGCTGCAATTCGTCTGTCTCCGGCGGAGATAACCAATTATTGGGAAAATTTGGGTCCGGAAGCTTCTGTGAAGCTCAATTCTCGAGCGAACTCTGCATTCCGTGCGACGATTTGGCGGAACTGGAATGGCTGTCGAATTTCGTTGAAGAATCATTTTCGACGGAGGAGATTGAGAAGGATTTTAAAGCTATTCCGTTCCTCCCCGGGGGGATCAGTACGGCGGCGACTCCAGAAACACCGTCGTCCTCAGGAGCAAATGCGTTTGGTTATGGAAGTGCAAAAACGACATCGTTTATTCACAGCGAAGCTCTCACGCTCCCCGGCAAAGCCCGAAGCAAACGTTCACGCGCTTCTCCTTGCGACTGGTCCACGCGGCTCCTCCAAGCGACGGCTCCGGAGAAAACGGAGGGGATGATGGCGAAGTCGGAAACGACATCGGGTCGGAAATGCCTGCATTGCGCGGCGGAGAAGACGCCGCAGTGGCGGACTGGGCCGATGGGCCCAAAAACGCTTTGTAACGCTTGTGGGGTCCGGTACAAGTCGGGTCGTCTTGTACCCGAATACCGACCCGCCTCTAGCCCGACATTTGTATCAACGAAGCACTCGAATTCTCACCGGAAGGTGATGGAGCTTCGACGGCAGAAGGAGATGCAACACCAAGAGCAGTTTGTAAGTCAAAGTTCGATATTCAGCAGATCCAACGGCTGTAATGAGTACTTGATCCACCGTCACAACGGCGGTGATTTCAGTCACATGATGTAG | 969 | 53.04 | MEVPEYPVGGYYGTGAGEFSPEKQKSAAEHFAVDEYLLDFSNEDVAMHSGFFDNVAGNCSDSSTVTAIESCNSSVSGGDNQLLGKFGSGSFCEAQFSSELCIPCDDLAELEWLSNFVEESFSTEEIEKDFKAIPFLPGGISTAATPETPSSSGANAFGYGSAKTTSFIHSEALTLPGKARSKRSRASPCDWSTRLLQATAPEKTEGMMAKSETTSGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVSTKHSNSHRKVMELRRQKEMQHQEQFVSQSSIFSRSNGCNEYLIHRHNGGDFSHMM | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29995099 | 29996171 | + | CePI673135_07g014410.1 | Cec07g1441 | 208220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1441 | 322 | Pfam | GATA zinc finger | 219 | 253 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec07g1441 | 322 | ProSitePatterns | GATA-type zinc finger domain. | 219 | 244 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec07g1441 | 322 | SMART | GATA_3 | 213 | 263 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec07g1441 | 322 | PIRSF | Txn_fac_GATA_plant | 14 | 304 | IPR016679 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0045893(InterPro) | |
Cec07g1441 | 322 | ProSiteProfiles | GATA-type zinc finger domain profile. | 213 | 249 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec07g1441 | 322 | Gene3D | - | 214 | 294 | IPR013088 | GO:0006355(InterPro)|GO:0008270(InterPro) | |
Cec07g1441 | 322 | PANTHER | GATA TRANSCRIPTION FACTOR | 30 | 285 | IPR051140 | GO:0005634(PANTHER)|GO:0030154(PANTHER) | |
Cec07g1441 | 322 | CDD | ZnF_GATA | 218 | 265 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec07g1441 | 322 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 215 | 277 | - | - | |
Cec07g1441 | 322 | FunFam | GATA transcription factor | 209 | 295 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1441 | Cec-Chr7:29995099 | Cec11g1570 | Cec-Chr11:29992165 | 1.90E-65 | dispersed | |
Cec06g0780 | Cec-Chr6:9194493 | Cec07g1441 | Cec-Chr7:29995099 | 2.80E-34 | transposed | |
Cec07g1441 | Cec-Chr7:29995099 | Cec09g0008 | Cec-Chr9:80815 | 6.00E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29958 | PF00320 | GATA | 1.90E-14 | CL0167 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1441 | - | - | - | 0.0 |