Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1441 ATGGAAGTGCCCGAGTATCCTGTCGGTGGCTACTACGGCACCGGAGCCGGTGAATTTTCGCCGGAGAAGCAGAAATCTGCCGCCGAGCATTTCGCTGTCGATGAATATTTATTGGACTTCTCGAATGAAGATGTGGCAATGCATAGCGGTTTCTTCGATAACGTCGCCGGAAATTGCAGTGATTCGTCGACGGTTACTGCGATTGAGAGCTGCAATTCGTCTGTCTCCGGCGGAGATAACCAATTATTGGGAAAATTTGGGTCCGGAAGCTTCTGTGAAGCTCAATTCTCGAGCGAACTCTGCATTCCGTGCGACGATTTGGCGGAACTGGAATGGCTGTCGAATTTCGTTGAAGAATCATTTTCGACGGAGGAGATTGAGAAGGATTTTAAAGCTATTCCGTTCCTCCCCGGGGGGATCAGTACGGCGGCGACTCCAGAAACACCGTCGTCCTCAGGAGCAAATGCGTTTGGTTATGGAAGTGCAAAAACGACATCGTTTATTCACAGCGAAGCTCTCACGCTCCCCGGCAAAGCCCGAAGCAAACGTTCACGCGCTTCTCCTTGCGACTGGTCCACGCGGCTCCTCCAAGCGACGGCTCCGGAGAAAACGGAGGGGATGATGGCGAAGTCGGAAACGACATCGGGTCGGAAATGCCTGCATTGCGCGGCGGAGAAGACGCCGCAGTGGCGGACTGGGCCGATGGGCCCAAAAACGCTTTGTAACGCTTGTGGGGTCCGGTACAAGTCGGGTCGTCTTGTACCCGAATACCGACCCGCCTCTAGCCCGACATTTGTATCAACGAAGCACTCGAATTCTCACCGGAAGGTGATGGAGCTTCGACGGCAGAAGGAGATGCAACACCAAGAGCAGTTTGTAAGTCAAAGTTCGATATTCAGCAGATCCAACGGCTGTAATGAGTACTTGATCCACCGTCACAACGGCGGTGATTTCAGTCACATGATGTAG 969 53.04 MEVPEYPVGGYYGTGAGEFSPEKQKSAAEHFAVDEYLLDFSNEDVAMHSGFFDNVAGNCSDSSTVTAIESCNSSVSGGDNQLLGKFGSGSFCEAQFSSELCIPCDDLAELEWLSNFVEESFSTEEIEKDFKAIPFLPGGISTAATPETPSSSGANAFGYGSAKTTSFIHSEALTLPGKARSKRSRASPCDWSTRLLQATAPEKTEGMMAKSETTSGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVSTKHSNSHRKVMELRRQKEMQHQEQFVSQSSIFSRSNGCNEYLIHRHNGGDFSHMM 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29995099 29996171 + CePI673135_07g014410.1 Cec07g1441 208220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1441 322 Pfam GATA zinc finger 219 253 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1441 322 ProSitePatterns GATA-type zinc finger domain. 219 244 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1441 322 SMART GATA_3 213 263 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1441 322 PIRSF Txn_fac_GATA_plant 14 304 IPR016679 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0045893(InterPro)
Cec07g1441 322 ProSiteProfiles GATA-type zinc finger domain profile. 213 249 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1441 322 Gene3D - 214 294 IPR013088 GO:0006355(InterPro)|GO:0008270(InterPro)
Cec07g1441 322 PANTHER GATA TRANSCRIPTION FACTOR 30 285 IPR051140 GO:0005634(PANTHER)|GO:0030154(PANTHER)
Cec07g1441 322 CDD ZnF_GATA 218 265 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1441 322 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 215 277 - -
Cec07g1441 322 FunFam GATA transcription factor 209 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1441 Cec-Chr7:29995099 Cec11g1570 Cec-Chr11:29992165 1.90E-65 dispersed
Cec06g0780 Cec-Chr6:9194493 Cec07g1441 Cec-Chr7:29995099 2.80E-34 transposed
Cec07g1441 Cec-Chr7:29995099 Cec09g0008 Cec-Chr9:80815 6.00E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29958 PF00320 GATA 1.90E-14 CL0167 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1441 - - - 0.0