Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1443 ATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAGTACAGAAATGAAAAGGGGAAAACAGACGGATCGAGAACAGAGAGATCAGAAACACCCAATTTACAGAGGCGTACGGAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAGCCGAGGAAGAAGTCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCAGCATCAAAGGTGATTCAGCAAAGGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCACGGCCGGTGTCCTTAATGCCGAGGGATATTCAGGAGGCGGCTGCCAAGGCGGCGGCCATGGTCGATTTCGATTCCACTACGGCGTCGTTTGCGTCGTTTAATGATGAAGAAGGGTCAGAGGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGATATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCCGGGGAATTGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACTACTCCGGTTACCTTCGACGGCGGCGATTGGGAGTGA 612 52.45 MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDSTTASFASFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGELDFCAVFSDQSTTPVTFDGGDWE 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30028836 30029447 - CePI673135_07g014430.1 Cec07g1443 208222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1443 203 Gene3D AP2/ERF domain 33 93 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 ProSiteProfiles AP2/ERF domain profile. 33 92 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 MobiDBLite consensus disorder prediction 13 32 - -
Cec07g1443 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 150 IPR051032 -
Cec07g1443 203 MobiDBLite consensus disorder prediction 1 34 - -
Cec07g1443 203 Pfam AP2 domain 33 82 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 SUPERFAMILY DNA-binding domain 33 93 IPR016177 GO:0003677(InterPro)
Cec07g1443 203 SMART rav1_2 33 98 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 FunFam Ethylene-responsive transcription factor 2 32 93 - -
Cec07g1443 203 CDD AP2 32 92 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1443 203 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1443 Cec-Chr7:30028836 Cec11g1573 Cec-Chr11:30021244 5.60E-39 dispersed
Cec07g1443 Cec-Chr7:30028836 Cec09g0183 Cec-Chr9:1640324 1.10E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29959 PF00847 AP2 9.40E-14 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1443 K09286 - csv:101222354 370.163