Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1455 ATGCACAGAATCGCCGGTTCACGACTCAGGTCGCTCAAGAACCATGCGGCCAATTTGGGGGCCTCTAGATTTGCAACATCCAGTGCAGTTGCTGCAAGACCAACGTCTGGAGGGTTTTTTATCTGGCTCACTGGAGAACGTTCAAGCTCTCTTCCCCCATTGGAAACACCACTATCTGGTATTACCCTCCCACCACCATTACCTGATCACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCTGGAGCATCACATTTACTGGAAAGGTTGGCCTTCAAGAGCACAACAAATCGAAGCCATTTGCGCATTGTTAGGGAAGTAGAAGCTATTGGTGGCAACACAGGGGCCTCTGCCTCCCGGGAGCAAATGGGATACACTTTTGATGCTTTAAAGACATATGTTCCAGAAATGGTGGAATTGCTAGTAGACTGTGTCAGGAATCCTGTATTTTTGGATTGGGAAATCAATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGGAGAACTTGCAAATAACCCCCAGGGCTTACTTCTCGAGGCAATTCATTCTGCTGGGTATTCTGGGGCACTTGCAAATCCTCTTGTGGCTCCAGAGTTTGCATTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGAGAACTATACTGCTCCTAGAATGGTGCTTGCAGCATCAGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCCATTGTGAAAGTGCCGGAATCTGCATATGTTGGAGGGGATTATCGTCGTCAAGCTGACTGTGGGAGCACACATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCACAAGGAGAAAGATGCCATTGTTTTGACGGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCTGGTAAAGGCATGCACTCGAGGTTATATCTCCGTGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGCACTGGTTCTGACTTTGTGGCCCAAGCAGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCCAGGTGCAGCTTAACCGTGCCAAAGAATCAACAAAATCTGCAGTTTTGATGAATCTAGAGTCCAGGATGATCGTGTCTGAGGATATTGGGAGGCAGATTTTGACATATGGAGAAAGGAAACCTGTAGAGCACTTCTTAAAGGCCGTAGACTCGATCACTTTGAACGATATTACTAACATTGCCCAGAAAGTTATATCTTCTCCTTTAACGATGGCATCATACGGAGACGTTATTAACGTCCCGACCTACGAGTCTGTTAACAGCAGAGAAGTGAGAGCGAAGAAACCACAACCAAAACAGAGAAGGGAAAATTTCAGAGGGAATTTCTTTGATTCATTAACTCGGCGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAATCGGTAACGACGGTTCTATTTGGGCTCAGAGCACCGGTTTCCCTCAGTACAAGCCAGAAGAGATTACTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCTCCGACTGGGTTGCACCTTGGTGGATCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGTATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCAATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTGTAA 1989 45.3 MHRIAGSRLRSLKNHAANLGASRFATSSAVAARPTSGGFFIWLTGERSSSLPPLETPLSGITLPPPLPDHVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEINEELQKLKAEIGELANNPQGLLLEAIHSAGYSGALANPLVAPEFALSRLDGTILEEFIAENYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPIVKVPESAYVGGDYRRQADCGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAQAVDIAASELISIATPGQVSQVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVISSPLTMASYGDVINVPTYESVNSREVRAKKPQPKQRRENFRGNFFDSLTRRRSKMSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSTGFPQYKPEEITAIMKDFDEPGSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30183925 30191590 - CePI673135_07g014550.1 Cec07g1455 208234

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1455 662 SMART prof_2 532 662 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 CDD PROF 533 661 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 FunFam Profilin 532 662 - -
Cec07g1455 662 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222(InterPro)|GO:0006508(InterPro)
Cec07g1455 662 FunFam mitochondrial-processing peptidase subunit alpha 290 498 - -
Cec07g1455 662 Pfam Insulinase (Peptidase family M16) 86 231 IPR011765 -
Cec07g1455 662 Pfam Profilin 532 662 IPR048278 GO:0003779(InterPro)
Cec07g1455 662 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
Cec07g1455 662 PANTHER METALLOPROTEASE 72 496 IPR050361 GO:0005739(PANTHER)
Cec07g1455 662 SUPERFAMILY Profilin (actin-binding protein) 533 661 IPR036140 -
Cec07g1455 662 SUPERFAMILY LuxS/MPP-like metallohydrolase 292 496 IPR011249 GO:0046872(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 615 630 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 635 648 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 602 611 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 558 571 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 648 661 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 583 597 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Plant profilin signature 532 545 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 284 IPR011249 GO:0046872(InterPro)
Cec07g1455 662 Gene3D - 290 504 - -
Cec07g1455 662 PRINTS Profilin signature 631 644 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Profilin signature 644 661 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Profilin signature 552 561 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Profilin signature 595 609 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Profilin signature 534 543 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 PRINTS Profilin signature 571 591 IPR005455 GO:0003779(InterPro)
Cec07g1455 662 Gene3D - 67 278 - -
Cec07g1455 662 Gene3D Dynein light chain 2a, cytoplasmic 530 662 - -
Cec07g1455 662 Pfam Peptidase M16 inactive domain 243 421 IPR007863 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1455 K01412 - - csv:101217854 933.71
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1455 Cec-Chr7:30183925 Cec11g0212 Cec-Chr11:2303911 1.40E-59 dispersed
Cec07g0813 Cec-Chr7:18896398 Cec07g1455 Cec-Chr7:30183925 4.20E-54 transposed
Cec11g0205 Cec-Chr11:2231379 Cec07g1455 Cec-Chr7:30183925 5.90E-207 transposed
Cec07g1455 Cec-Chr7:30183925 Cec09g0023 Cec-Chr9:237917 3.00E-57 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi9g263 . . . . . . . . Cmo08g00707 Cmo17g00727 Cma01g00091 . Car01g00075 Car14g01139 Sed06g2183 Cpe12g00643 Cpe17g00524 Bhi01g03373 Tan04g2694 Cmetu04g1863 Lac11g0782 Hepe02g1450 . . Cla07g01272 Cam07g1227 Cec07g1455 Cco07g1416 Clacu07g1338 Cmu07g1316 Cre07g1699 . Cone17ag0127 . . Lsi02g02980 . Chy04g00956 . . . . . . . . . . Cmo01g00092 Cmo14g01321 Cma08g00743 Cma17g00758 Car08g00630 Car17g00703 Cpe02g01699 Cpe03g01090 Bhi09g00471 . . . . . . Cla09g00022 Cam09g0024 . Cco09g0025 . . . Lsi07g00531 Csa03g02348 . Cme04g01148
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT2G37620 96.8 7.5e-215 743.0
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT2G37620 96.3 3.7e-214 740.7
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT2G37620 96.0 1.9e-213 738.4
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT2G37620 94.7 2.1e-212 734.9
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT2G37620 95.8 2.7e-212 734.6
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT2G37620 97.2 4.1e-205 710.7
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT2G37620 95.6 3.9e-203 704.1
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT2G37620 95.8 5.2e-200 693.7
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT5G59370 97.1 4.9e-214 740.3
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT5G59370 96.8 4.9e-214 740.3
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT5G59370 97.1 6.4e-214 740.0
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT5G59370 96.6 1.4e-213 738.8
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT5G59370 93.9 8.6e-211 729.6
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT5G59370 96.9 3.9e-203 704.1
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT5G59370 94.4 5.2e-200 693.7
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT5G59370 94.7 7.1e-197 683.3
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT3G46520 97.1 2.2e-214 741.5
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT3G46520 97.3 2.9e-214 741.1
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT3G46520 96.8 6.4e-214 740.0
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT3G46520 96.8 1.4e-213 738.8
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT3G46520 94.2 3.9e-211 730.7
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT3G46520 97.2 1.7e-203 705.3
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT3G46520 94.7 2.4e-200 694.9
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT3G46520 94.9 3.2e-197 684.5
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT3G12110 97.1 3.4e-215 744.2
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT3G12110 97.1 4.4e-215 743.8
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT3G12110 96.6 1.7e-214 741.9
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT3G12110 96.0 4.1e-213 737.3
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT3G12110 95.0 2.7e-212 734.6
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT3G12110 96.9 2.1e-204 708.4
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT3G12110 95.6 1.5e-202 702.2
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT3G12110 95.8 2.0e-199 691.8
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT3G18780 92.6 6.2e-209 723.4
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT3G18780 92.3 1.8e-208 721.8
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT3G18780 92.3 2.3e-208 721.5
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT3G18780 92.0 8.9e-208 719.5
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT3G18780 92.0 1.2e-207 719.2
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT3G18780 93.6 2.0e-199 691.8
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT3G18780 93.1 3.4e-199 691.0
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT3G18780 93.5 4.6e-196 680.6
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT1G49240 92.8 2.1e-209 724.9
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT1G49240 92.6 6.2e-209 723.4
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT1G49240 92.6 8.1e-209 723.0
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT1G49240 92.3 4.0e-208 720.7
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT1G49240 91.8 2.0e-207 718.4
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT1G49240 93.6 2.0e-199 691.8
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT1G49240 93.1 3.4e-199 691.0
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT1G49240 93.8 1.6e-196 682.2
Cec09g1439 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 2.9e-214 741.1
Cec10g1770 . 91 467 Cytoskeleton Gene Families AT5G09810 96.6 6.4e-214 740.0
Cec02g2127 . 1 377 Cytoskeleton Gene Families AT5G09810 96.0 3.2e-213 737.6
Cec07g0364 . 1 377 Cytoskeleton Gene Families AT5G09810 96.0 3.2e-213 737.6
Cec09g2081 . 1 377 Cytoskeleton Gene Families AT5G09810 95.5 7.8e-212 733.0
Cec02g0074 . 1 360 Cytoskeleton Gene Families AT5G09810 98.6 1.3e-206 715.7
Cec04g0957 . 1 360 Cytoskeleton Gene Families AT5G09810 96.7 1.0e-203 706.1
Cec04g1250 . 1 356 Cytoskeleton Gene Families AT5G09810 98.6 3.0e-203 704.5
Cec11g0212 . 1 133 Cytoskeleton Gene Families AT2G19760 76.7 8.6e-57 216.5
Cec09g0023 . 241 371 Cytoskeleton Gene Families AT2G19760 72.5 3.6e-55 211.1
Cec07g1455 . 532 662 Cytoskeleton Gene Families AT2G19760 73.3 1.8e-54 208.8
Cec11g1559 . 305 435 Cytoskeleton Gene Families AT2G19760 72.5 4.4e-53 204.1
Cec11g0213 . 1 117 Cytoskeleton Gene Families AT2G19760 76.9 7.8e-50 193.4
Cec11g0212 . 1 133 Cytoskeleton Gene Families AT4G29350 76.7 1.5e-56 215.7
Cec09g0023 . 241 371 Cytoskeleton Gene Families AT4G29350 73.3 1.4e-54 209.1
Cec07g1455 . 532 662 Cytoskeleton Gene Families AT4G29350 71.8 2.0e-53 205.3
Cec11g1559 . 305 435 Cytoskeleton Gene Families AT4G29350 70.2 9.2e-51 196.4
Cec11g0213 . 1 117 Cytoskeleton Gene Families AT4G29350 76.9 1.1e-48 189.5
Cec11g0213 . 1 87 Cytoskeleton Gene Families AT5G56600 78.2 5.6e-38 153.7
Cec11g0212 . 1 133 Cytoskeleton Gene Families AT4G29340 84.3 1.5e-64 242.3
Cec09g0023 . 241 371 Cytoskeleton Gene Families AT4G29340 73.9 3.0e-57 218.0
Cec11g1559 . 305 435 Cytoskeleton Gene Families AT4G29340 72.4 1.5e-53 205.7
Cec07g1455 . 532 662 Cytoskeleton Gene Families AT4G29340 67.9 5.0e-52 200.7
Cec11g0213 . 1 117 Cytoskeleton Gene Families AT4G29340 65.8 2.9e-44 174.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002061 3 2 3 0 3 2 3 2 1 2 2 1 3 2 2 2 1 3 3 2 2 2 2 2 2 2 2 5 2 2 65