Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1483 ATGGCAATGGAGGGAAAGCAGAAGTTCTTCCATGGAACGCTTGAAGTTACCATCTTCCATGCAACGGCTTACACCCCGCCATCACCTTTGGATTGCATATTTGCTGGAGGAAAGCGTAGCTATGTGACCATCAAGATAGACAACAAGGAGGTTGCCCAGACAAGCCATGAACATGACCGTGTTTGGAACCAGACATTCCGAGTTCTATGCGCACATCCATTGACTTCTACCGTCACCATTACAATGAAAACATCTCGTTCTGTCTTGGGTAAATTCTACATTCAAGCCCAACGGATTTTGAAAGAAGCAAGTTTTATCAATGGTTTCTTTCCACTTCTTATGGAAAATGGGAAGAAGAGTCCGGAGCTCAAACTTCGATTCATGCTATGGTTTAAACCAGCAGTATATGAATTAAGCTGGAAAAAGATGCTGGGAAATGGAGAATACAAGGGGCTGAGAAATGCAACATTTCCTTTAAGGTCCAACTGTCATGTTACTCTGTATCAAGATGCTCACCACCTCCCTACTTTTCAACCTCCATTTCATGGTTCAAGTACACCAAAAAGGCTATGGGAAGATGTATACAAGGCCATAGATAATGCAAAGCATTTGGTTTACATTGCAGGCTGGTCCTTCAATCCAAAGATGGTGCTGGTAAGGGACTCTCAGACAGATATACCCTATGCTTTAGGAGTAACGCTTGGAGAGTTGTTGAAGCAGAAGGCAGAAGAAGGAGTAGCTGTGAGAATACTGATTTGGGATGATGAAACATCCCTTCCTATCATCAAGAATGCTGGGATAATGAACACACATGATGAAGATGCTCGCGCATATTTCTTGCACTCAAAAGTCATATGTAGATTGTGCCCCAAATTACATCCTATGTCTCCCCCAATTTTCTCTCATCATCAGAAAACCATAATCGTAGATGCTCAAACTCACATCAATGCACGAAACAGGGAGATTATGAGTTTCATTGGGGGTTTAGATCTTTGTGATGGTCGCTACGATACAGAACAACACTCACTGTTTCATACTTTGAACACAGAATCCCACTGTTGTGATTTCTATCAGACGAGTATATCAGGTGCCAAACTTCAAAAAGGAGGGCCAAGAGAGCCATGGCATGATGTTCACGCTTGTGTAACAGGTGAAGCTGCATGGGATATATTAACAAACTTTGAGCAACGATGGACTAAGCAATCAGATGCTTCGTTGTTAGTACCAACAAGCATCTTATCAAAATTGATGCCCCAGCTCGAATCGAACACAAACCCACAAAAGGATTGGAATGCGCAAGTTTTTCGATCAATTGACTATTTGTCTGCTGGCCAAATGTTCAGAAACATGACCATTGAACGAACCATCCATGAAGCTTACGTTGAAGCTATCAGGCGAGCCGAGAGATTTATTTACATTGAAAACCAATATTTTATAGGAGGGTGTCACTTGTGGGACAAAGATCAACATTGTGGATGCACGAATTTGATACCGATTGAGATTGCGCTCAAGGTGGCTAATAAGATTAAGGCAAAGGAGAGGTTTGCAGTTTACATAGTGATTCCAATGTGGCCAGAAGGACCTCCAGAGAGTGAATCAGTTGAGGATATGCTACACTGGACAAGGCAGACAATGACAATGATGTATAGACTGATTGGAGAAGCAATCCAAGAAACTGGGGAAAAGGCCCATCCAAGAGATTACCTGAATTTCTTTTGCCTTGCAAACAGAGAGGAAGAGGGAAAGTGGGACTTTGTTCCCCCACACAGTCCCCAACATGCAACAAAGTACTGGAATGCCCAACAACATAGGAGGTTCATGATCTATGTCCATTCCAAGGTCATGATAGTGGACGATTTGTACATTCTGATTGGATCCGCAAACGTCAACCAGAGATCCATGGACGGAGAGAGAGATACAGAGATAGCAATCGGATGCTACCAAATAGAAAATGATGGAGAAGAGTTACCAAATGGAAGAGACATTTCAACATTCCGATTGTCGCTTTGGTACGAACATACACGAAGATTCGAAGAACTGTTCTTAAACCCCGAAAGCTTGCATTGCGTTCAAAGGGTTTGTTCAATAGGAGATAAATCGTGGACAATTTACAGTGGAGAAGAGGTTGAAGACATGAAAGGGGTTCATCTGGTAACGTACCCTGTGAAGGTGAAAGAGGATGGGTCGATGGAGGATTTGGAAGAAAATGGAGGCCATTTTCCTGATACCAAATGCCCCATTAAAGGAAGAAGATCAATGATGTTGCCGCCCATTTTCACAACCTAG 2286 42.69 MAMEGKQKFFHGTLEVTIFHATAYTPPSPLDCIFAGGKRSYVTIKIDNKEVAQTSHEHDRVWNQTFRVLCAHPLTSTVTITMKTSRSVLGKFYIQAQRILKEASFINGFFPLLMENGKKSPELKLRFMLWFKPAVYELSWKKMLGNGEYKGLRNATFPLRSNCHVTLYQDAHHLPTFQPPFHGSSTPKRLWEDVYKAIDNAKHLVYIAGWSFNPKMVLVRDSQTDIPYALGVTLGELLKQKAEEGVAVRILIWDDETSLPIIKNAGIMNTHDEDARAYFLHSKVICRLCPKLHPMSPPIFSHHQKTIIVDAQTHINARNREIMSFIGGLDLCDGRYDTEQHSLFHTLNTESHCCDFYQTSISGAKLQKGGPREPWHDVHACVTGEAAWDILTNFEQRWTKQSDASLLVPTSILSKLMPQLESNTNPQKDWNAQVFRSIDYLSAGQMFRNMTIERTIHEAYVEAIRRAERFIYIENQYFIGGCHLWDKDQHCGCTNLIPIEIALKVANKIKAKERFAVYIVIPMWPEGPPESESVEDMLHWTRQTMTMMYRLIGEAIQETGEKAHPRDYLNFFCLANREEEGKWDFVPPHSPQHATKYWNAQQHRRFMIYVHSKVMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQIENDGEELPNGRDISTFRLSLWYEHTRRFEELFLNPESLHCVQRVCSIGDKSWTIYSGEEVEDMKGVHLVTYPVKVKEDGSMEDLEENGGHFPDTKCPIKGRRSMMLPPIFTT 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30426522 30429291 + CePI673135_07g014830.1 Cec07g1483 208262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1483 761 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 127 IPR035892 -
Cec07g1483 761 Gene3D Endonuclease Chain A 447 653 - -
Cec07g1483 761 PANTHER PHOSPHOLIPASE D 38 744 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cec07g1483 761 Pfam Phospholipase D C terminal 678 750 IPR024632 -
Cec07g1483 761 Gene3D Endonuclease Chain A 172 432 - -
Cec07g1483 761 Gene3D C2 domain 2 131 IPR035892 -
Cec07g1483 761 SMART pld_4 300 335 IPR001736 GO:0003824(InterPro)
Cec07g1483 761 SMART pld_4 606 633 IPR001736 GO:0003824(InterPro)
Cec07g1483 761 Pfam C2 domain 12 106 IPR000008 -
Cec07g1483 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 298 335 IPR001736 GO:0003824(InterPro)
Cec07g1483 761 Pfam Phospholipase D Active site motif 608 633 IPR001736 GO:0003824(InterPro)
Cec07g1483 761 SUPERFAMILY Phospholipase D/nuclease 144 409 - -
Cec07g1483 761 SUPERFAMILY Phospholipase D/nuclease 426 690 - -
Cec07g1483 761 PIRSF PLD_plant 2 761 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cec07g1483 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1483 Cec-Chr7:30426522 Cec09g0278 Cec-Chr9:2409357 2.70E-171 dispersed
Cec07g1483 Cec-Chr7:30426522 Cec07g1387 Cec-Chr7:29456256 2.40E-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1483 K01115 - csv:101206396 1513.43