Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1494 | ATGGAGGAAAATTTGTCGAATTTAACTTCAGCTTCTGGTGAAGCTAGTGCCTGCTCCGGCAACCATTCCGATCAGATTCCGACCAACTATTCCGGCCAGTATTTTTCTACCCCACCACCACCAAAAAAGAAGAGAAACCTCCCCGGAAATCCAGACCCAGATGCGGAAGTGATAGCTTTATCGCCGAAGACGCTTATGGCGACGAATAGATTCGTGTGCGAGATCTGTGGCAAAGGGTTTCAGAGAGATCAGAATCTTCAACTTCATAGAAGAGGGCACAATCTTCCATGGAAGTTGAAGCAAAGAGCAAACAAAGAGATAATAAGGAAGAAAGTTTATGTGTGCCCAGAAACAAGTTGTGTTCATCATGACCCATCAAGAGCATTAGGGGACTTGACAGGAATCAAGAAGCACTTTTGTAGAAAACATGGTGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAGGTATGCAGTTCAATCAGATTGGAAAGCTCATTCCAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACAATTTTCTCAAGGAGGGATAGTTTCATCACCCACAGAGCTTTTTGTGATGCTTTGGCAGAGGAAAGTGCAAGAGCCATTACATCAAACCCAATACTAATGAATAATAATAATACTAATAATACTAATAATAGTTATAATCAAAACCATCTTCTTCCTCCATTTTCTTCCACTCCCATTTCTCACTTAAACTTCCAAATTACACAACAAACCCATTTCAATCCTCCCTTAGATCATCATATGAACTCATTTTCTCTCAAAAAAGAACACCAATTACAAAATAATAATATTCCCCCATGGTCAGACTGTCCTAATTCAAGCTCAAATAATCATAATAATCATCCAATTATAAACCCTAATCATATTGTTGGTCCCACTTCTCTTCATCTAATTCCAAGTGCTTCTTCCCTTTCTTCTCCACACATGTCAGCCACAGCACTTCTTCAGAAAGCAGCTCAAATGGGAGCTACCATGAGCCATAATACTGAGCCACCACACACAATCACTCCCCAACAACAACATTACTCTGATTCTTCTGCAACCAATAATAATACTAATAATAATACAAATTGTAATTTTGGCCTTAATTTATCCTCATCCTCCTCCTCCTCCTCACGTGACATTACTCATCAGCAACAGAATCAAATTTTGATGATGGGGAGTAGTACTAGTTGTAGTAGTACTACTGAAGCTGCAGGGCTTTCTCATGTACTGCCATTCTACAGGAATAAATCTTCTTCTTCACATGATCACCTCCTTCTTCATCATCATGCTAATTTTGATCAAGGAGGGACTTGTTTTGAATTAGATGAATTTGGAGGGGTTTTCAAGAAAAGTGATCATAATTCAAGTAGTGATCAAGCAGGATTGAGTACAAGAGATTTCTTGGGGTTAAGAGCTATTTCTCACACTGAGTTCTTGACTAATATTGCAGCTGCTGGTTATAGTACTAATTGCATCAATAATAATAATAATGTTGCTGCTCAAACTCCTCAAGCCCAAATTCAAAATCAATCCACCTGGAAAGGTTAG | 1572 | 39.06 | MEENLSNLTSASGEASACSGNHSDQIPTNYSGQYFSTPPPPKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRANKEIIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEESARAITSNPILMNNNNTNNTNNSYNQNHLLPPFSSTPISHLNFQITQQTHFNPPLDHHMNSFSLKKEHQLQNNNIPPWSDCPNSSSNNHNNHPIINPNHIVGPTSLHLIPSASSLSSPHMSATALLQKAAQMGATMSHNTEPPHTITPQQQHYSDSSATNNNTNNNTNCNFGLNLSSSSSSSSRDITHQQQNQILMMGSSTSCSSTTEAAGLSHVLPFYRNKSSSSHDHLLLHHHANFDQGGTCFELDEFGGVFKKSDHNSSSDQAGLSTRDFLGLRAISHTEFLTNIAAAGYSTNCINNNNNVAAQTPQAQIQNQSTWKG | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30546187 | 30548563 | - | CePI673135_07g014940.1 | Cec07g1494 | 208273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1494 | 523 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 126 | 205 | - | - | |
Cec07g1494 | 523 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 109 | 143 | - | - | |
Cec07g1494 | 523 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cec07g1494 | 523 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 147 | 171 | - | - | |
Cec07g1494 | 523 | Gene3D | Classic Zinc Finger | 67 | 94 | - | - | |
Cec07g1494 | 523 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 26 | 491 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec07g1494 | 523 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 71 | 93 | IPR013087 | - | |
Cec07g1494 | 523 | FunFam | protein indeterminate-domain 12-like | 50 | 119 | - | - | |
Cec07g1494 | 523 | SUPERFAMILY | beta-beta-alpha zinc fingers | 70 | 168 | IPR036236 | - | |
Cec07g1494 | 523 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 174 | 210 | - | - | |
Cec07g1494 | 523 | Pfam | Zinc finger, C2H2 type | 71 | 93 | IPR013087 | - | |
Cec07g1494 | 523 | Gene3D | Classic Zinc Finger | 125 | 206 | - | - | |
Cec07g1494 | 523 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cec07g1494 | 523 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 73 | 93 | IPR013087 | - | |
Cec07g1494 | 523 | SMART | c2h2final6 | 148 | 168 | IPR013087 | - | |
Cec07g1494 | 523 | SMART | c2h2final6 | 113 | 143 | IPR013087 | - | |
Cec07g1494 | 523 | SMART | c2h2final6 | 71 | 93 | IPR013087 | - | |
Cec07g1494 | 523 | MobiDBLite | consensus disorder prediction | 335 | 391 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1030 | Cec-Chr4:29882504 | Cec07g1494 | Cec-Chr7:30546187 | 8.50E-90 | dispersed | |
Cec07g1494 | Cec-Chr7:30546187 | Cec10g2045 | Cec-Chr10:35188726 | 7.50E-88 | dispersed | |
Cec02g1072 | Cec-Chr2:20380393 | Cec07g1494 | Cec-Chr7:30546187 | 5.10E-90 | transposed | |
Cec09g0710 | Cec-Chr9:6352375 | Cec07g1494 | Cec-Chr7:30546187 | 8.60E-89 | transposed | |
Cec07g1494 | Cec-Chr7:30546187 | Cec09g0068 | Cec-Chr9:572197 | 1.40E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29964 | PF00096 | zf-C2H2 | 0.0023 | CL0361 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1494 | K25870 | - | csv:101204728 | 691.419 |