Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1525 ATGAGTAATTGGTTGGGTTTTTCTCTTACTCCCCATCTCAGAATCCATGATGCTGCTGCCCCCGCCGATGAACAACCCGACCACGCCGCCTTCCCGCATCTCATGCCGCTCCGCTCCGATGGATCTCTTTGTATCGCCGCCGCCCACGATTGGAGATCGTATGAGAATGAAATGGGTGCAACGAAGGAAGAGGAAAGTCCAAAGCTTGAGGACTTTCTGGGGAATTGCTATTCAAACTCACCGCCAAACGATCAGACGCATAGTAGCAACGCCGCCGCCTTTATTCAGCCGAATAATAATAATAATAATAATAGTAGTAGTAGTAGTAATAATAATAATAATGATGATGATAAATACCATTACCAAGCGGATCATCAAACCCATCAATCTCTAATTCCTAACAATACTAATGGAATTTATAAGTCCTGGTTGGGACCCACTCCGCAAAATGAGTGTCGGTTTCAATCTCTTTCTCTCGGTATGAGCCCCAACTCCCAAAACGACGTCGCTTCATTGCCTTCACCGCCCTCGCCGCCGCCGCATATGGCTGGTGATTCCCGGAAACGCCCCATGCCGGTAGCCAAGCCTCTGATTAAAGAACCTGTACCTAGAAAATCCATCGATACTTTTGGACAAAGAACCTCCCAGTATCGCGGTGTCACAAGGCATAGATGGACAGGAAGATATGAGGCACATTTATGGGATAACAGCTGTAGAAAAGAGGGACAAACAAGGAAGGGAAGGCAAGTTTATCTTGGTGGTTATGATAAGGAAGAGAAAGCGGCACGAGCGTATGACTTAGCTGCTTTAAAATATTGGGGACCAACTACGCATATAAATTTTCCGCTGAGCACTTATGAAAACGAGCTGGAAGAGATGAAGAACATGACCAGACAAGAGTTTGTAGCCAATTTGAGAAGGAAAAGCAGTGGATTCTCAAGAGGAGCTTCAATGTACAGAGGAGTTACAAGACATCATCAACATGGAAGGTGGCAAGCTAGAATAGGAAGGGTTGCAGGAAATAAAGATTTGTACCTTGGCACATTTAGCACACAAGAGGAGGCAGCGGAGGCGTATGACATAGCAGCAATCAAGTTTAGGGGGACAAGTGCAGTAACAAATTTCGACATTAGTAGGTATGACGTAAAGAGGATTTGCTCTAGCTCGACTCTGATTGCTAGTGACCTTGCAAAACGTTCACCATTAAAGGACGGTACTCCCTCAACTAATGAAGACTATTCTGCCTGTGCTTCTCCATCATCGTCCTCGCAACCTCTCTTGGCCATTACTGGCGATGGTGGTGCTGAGAGCCACCACGAGTTGGCTGACGTGGTTTGGTGTGACAATACTGCTACAGACGATAGTAATCAGCACCACGAGAACGTAGCAAAGATGAACAACGACTTGAGTTTGATGGGTTCGAGCAATAGAATGATGGATCCATCGTCGAAGTGCTCTCCGGTGCAAAACAATGAAGAGTTCGGGATTGGGGTCGGGGCTGGAGGGGAGTACTCACAAGGCTATTTCTCAATGCAAGAAGAAAAATATGAAGATGGGAATGAGGAGGGTGATCAAAATAGTAGGCAGGTTAGTGTAACATTGGCTCATCATCATGTTCCAATGTTTGCACTATGGAACCAATAA 1644 45.86 MSNWLGFSLTPHLRIHDAAAPADEQPDHAAFPHLMPLRSDGSLCIAAAHDWRSYENEMGATKEEESPKLEDFLGNCYSNSPPNDQTHSSNAAAFIQPNNNNNNNSSSSSNNNNNDDDKYHYQADHQTHQSLIPNNTNGIYKSWLGPTPQNECRFQSLSLGMSPNSQNDVASLPSPPSPPPHMAGDSRKRPMPVAKPLIKEPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYENELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPLKDGTPSTNEDYSACASPSSSSQPLLAITGDGGAESHHELADVVWCDNTATDDSNQHHENVAKMNNDLSLMGSSNRMMDPSSKCSPVQNNEEFGIGVGAGGEYSQGYFSMQEEKYEDGNEEGDQNSRQVSVTLAHHHVPMFALWNQ 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30873012 30876492 + CePI673135_07g015250.1 Cec07g1525 208304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1525 547 Pfam AP2 domain 319 368 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 Pfam AP2 domain 216 274 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 SMART rav1_2 216 288 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 SMART rav1_2 318 382 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 MobiDBLite consensus disorder prediction 157 191 - -
Cec07g1525 547 CDD AP2 215 284 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 MobiDBLite consensus disorder prediction 403 421 - -
Cec07g1525 547 SUPERFAMILY DNA-binding domain 317 378 IPR016177 GO:0003677(InterPro)
Cec07g1525 547 SUPERFAMILY DNA-binding domain 215 284 IPR016177 GO:0003677(InterPro)
Cec07g1525 547 FunFam AP2-like ethylene-responsive transcription factor ANT 215 284 - -
Cec07g1525 547 MobiDBLite consensus disorder prediction 157 171 - -
Cec07g1525 547 ProSiteProfiles AP2/ERF domain profile. 318 376 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 MobiDBLite consensus disorder prediction 71 120 - -
Cec07g1525 547 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 101 438 - -
Cec07g1525 547 MobiDBLite consensus disorder prediction 76 116 - -
Cec07g1525 547 ProSiteProfiles AP2/ERF domain profile. 216 282 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 CDD AP2 317 378 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 PRINTS Ethylene responsive element binding protein signature 358 378 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 MobiDBLite consensus disorder prediction 399 421 - -
Cec07g1525 547 Gene3D AP2/ERF domain 318 378 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 Gene3D AP2/ERF domain 215 284 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec07g1525 547 FunFam AP2-like ethylene-responsive transcription factor 317 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2889 Cec-Chr5:39038248 Cec07g1525 Cec-Chr7:30873012 1.40E-101 dispersed
Cec07g1525 Cec-Chr7:30873012 Cec11g0922 Cec-Chr11:14235145 2.50E-94 dispersed
Cec07g1525 Cec-Chr7:30873012 Cec08g1733 Cec-Chr8:28445373 5.60E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29968 PF00847 AP2 4.20E-13 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1525 K09285 - csv:101205762 890.182