Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1538 ATGAGACCGCTCCAGCCGCCTCAGGGTGCGAATCCTCCCACCGATCGTACTCGTCGTCGACCGCAGCTAAATAATCTTCAGCTTCCGCAGAGGGACAATACGTCTTTGGCTGTTCCTCTCCCTTTGCCTCCCACCTCCTCCAACTCTGCGCATCCTCCTTCCACCAGTCAACTCCACAACGCCAACCGCCCGCCGGACCCTCATCCTCAGAAGCGTCAGGCTTTTAGCCTTTCGGATTTTGACCGAGTGAGCCGAATCGGAAGTGGATGCGGAGGCACCGTCTATAAAGTGGTTCACCGTCCCACCGGCGGTGTTTATGCTCTCAAGGTCATTTACGGCAACCATGAGGATGCGGTTAGGCTCCAGATGTGCCGGGAGGTCGAGATCCTTCGTGACGTTGACAATCCCTATGTGGTCAAGTGCCACGATATGTTCGATCATAACGGCGAAATCCAGGTTCTTCTTGAGTACATGGATCGGGGTTCTTTAGAAGGAACGCACATCCCTCAAGAACACCATCTCTCTGATTTGGCTCGCCAGATTCTTAGCGGCCTCGCTTATCTCCATAGCCGCCGTATCGTCCATCGCGACATCAAACCCTCGAATCTCCTCATCAATTCCAGAAGACAGGTTAAGATCGCTGATTTCGGCGTCGGTCGAATCTTGGAACAGACTATGGACCCTTGCAATTCCTCGGTTGGGACTATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGTCAGTACAATGGGTATGCTGGTGATATTTGGAGCTTTGGGGTTAGCATATTGGAATTCTATCTCGGTCGGTTTCCTCTTGCTGTCGAGAGACCTGGGGATTGGGCGAGCTTGATGTGCGCTATTTGTATGGCTCAGCCACCAGAGGCCCCGGCCACTGCTTCCCCGGAGTTTCGCCACTTTATTGCCTGTTGTTTGCAAAGAGAGGCTCGGAAGAGATGGACTGCAGCTGCATTACTGGAACATGCGTTCATAACCAGGAAAAATGGAGCAACTCAGTACCAGAATCAGCAAGCTCATCATCAGAATCTTCGTCAACTATTACCTCCTCCACCCCTTCATCCTTCCAGCCTTTCCTGA 1110 52.25 MRPLQPPQGANPPTDRTRRRPQLNNLQLPQRDNTSLAVPLPLPPTSSNSAHPPSTSQLHNANRPPDPHPQKRQAFSLSDFDRVSRIGSGCGGTVYKVVHRPTGGVYALKVIYGNHEDAVRLQMCREVEILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPATASPEFRHFIACCLQREARKRWTAAALLEHAFITRKNGATQYQNQQAHHQNLRQLLPPPPLHPSSLS 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30964063 30965172 + CePI673135_07g015380.1 Cec07g1538 208317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1538 369 CDD PKc_MAPKK_plant_like 78 336 - -
Cec07g1538 369 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 60 342 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cec07g1538 369 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524(InterPro)
Cec07g1538 369 SUPERFAMILY Protein kinase-like (PK-like) 59 355 IPR011009 -
Cec07g1538 369 Gene3D Phosphorylase Kinase; domain 1 55 159 - -
Cec07g1538 369 MobiDBLite consensus disorder prediction 11 63 - -
Cec07g1538 369 FunFam Mitogen-activated protein kinase 2 160 348 - -
Cec07g1538 369 ProSiteProfiles Protein kinase domain profile. 80 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1538 369 MobiDBLite consensus disorder prediction 345 369 - -
Cec07g1538 369 SMART serkin_6 80 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1538 369 Pfam Protein kinase domain 82 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1538 369 Gene3D Transferase(Phosphotransferase) domain 1 161 358 - -
Cec07g1538 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1538 369 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1584 Cec-Chr1:30477094 Cec07g1538 Cec-Chr7:30964063 9.00E-87 dispersed
Cec03g1594 Cec-Chr3:34045737 Cec07g1538 Cec-Chr7:30964063 3.10E-53 dispersed
Cec07g1538 Cec-Chr7:30964063 Cec11g0214 Cec-Chr11:2311386 2.90E-54 dispersed
Cec07g1535 Cec-Chr7:30935828 Cec07g1538 Cec-Chr7:30964063 4.40E-18 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72153 PF00069 Pkinase 1.20E-59 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1538 K13413 - csv:101219669 689.493