Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1539 ATGGGGAAGACGCAAGAGGACGATATTTCGCAGAAGCTTCCTCGCTGCTGTGGAACTTCGCTATATTGCCTTCGCTTCCCATCAGCCACCCCAACTCGACTTCTTCTTCGCTTGATCTATAATTTTGGTGAAGTCGAGAATCTTATTTCCAAGAACTTTCCTTCTGGCTGGCCTTTGCCGGCTGTGGTGGCCAGAGATTTTATTTTTAAGCAACTGAATCACCTATACGATCCAAACTACTGGGATTCGACCTGGATATCCTCGTTGCGTCAGTTCAACTTCATCTCCAATCTGATGGGATCAACAGAGGAGAAAACAAATTACCTATCAGACGAAGAACTTCCGTTGAAGTCATCACCAGTCGCGAAGAACGTATTGCATAGCTTTGATAGTGAGACGGCTCCTGTACGTTCTTCCCCAGATGATACAAGATGGTGGAAGACTAACAACATTCGTATTAGACCTCTTAGAAGTGCTTATATAGTGTTGGTTAGAGCAAAGATCAACGTGCTTCTACCTTTTGGTCCTTTGGCAATTCTGCTACATTACTTAACGGGAAAGCATGGATTGGTCTTCTTTTTCACTTTACTTGGAATTACACCCTTGGCAGAACGTCTTGGTTATGCAACTGAGCAGCTTGCTTTCTACACTGGACCAACAGTTGGTGGTCTTTTGAATGCAACTTTTGGAAATGCAACCGAAATGATTATTTCAATATATGCGTTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCATTACTGGGGTCAATCTTGTCAAATATGCTTCTTGTGCTTGGTTGCGCTTTCTTCACTGGTGGGATTGTTCATCATAAGAAGGTGCAGGTTTTCAATAAGGGTGCTGCTGTTGTGAATTCGGGATTGTTGTTGATGGCTGTTATGGGAACAACTTTCCCGGCGGTGCTTCATTTCACCCACACAGAACTTCATTCCGGAGAGTCAGCATTATCTCTTTCAAGATTTAGCAGTTGTATAATGTTAGTTGCATATGCAAGCTACCTTTTCTTTCAACTAAAAAGTCAGCATAATCTCTATGGTCCCCTTGATGAGGAAGTTGGTGATGAAGTTGAGGATGATTCTGAGATTTATGCTTGGGAAGCAATTGGATGGCTTGCCATCTTGACTGTATGGGTATCTATTTTATCTGGATACCTTGTTGATGCTATCCAGGGAGCATCTGAATCATTAAATTTGCCAGTGGCTTTTATTAGTGTAATTTTGTTGCCAATTGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTGACATCACCCTTGGGGTTGCTATTGGATCATCAACACAAATATCCATGTTTGTGATCCCGTTTTGCGTAGTAGTTGGATGGTGCATGGGAGAACCAATGGACTTGAACTTTAAACTCTTTGAAACAGCAACTTTGTTTATCACTGTGCTGGTGGTGGCCTTTATGTTGCAGGAGGGGACATCAAATTATTTCAAAGGTCTAATGCTTATTCTATGTTACCTCATAGTGGCAGCCAGTTTTTTTGTACACGTTGACCCTAGTAATGATGATGATTAA 1584 41.92 MGKTQEDDISQKLPRCCGTSLYCLRFPSATPTRLLLRLIYNFGEVENLISKNFPSGWPLPAVVARDFIFKQLNHLYDPNYWDSTWISSLRQFNFISNLMGSTEEKTNYLSDEELPLKSSPVAKNVLHSFDSETAPVRSSPDDTRWWKTNNIRIRPLRSAYIVLVRAKINVLLPFGPLAILLHYLTGKHGLVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKKVQVFNKGAAVVNSGLLLMAVMGTTFPAVLHFTHTELHSGESALSLSRFSSCIMLVAYASYLFFQLKSQHNLYGPLDEEVGDEVEDDSEIYAWEAIGWLAILTVWVSILSGYLVDAIQGASESLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGEPMDLNFKLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSNDDD 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30966589 30972077 + CePI673135_07g015390.1 Cec07g1539 208318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1539 527 FunFam Vacuolar cation/proton exchanger 362 518 - -
Cec07g1539 527 NCBIfam calcium/proton exchanger 171 517 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Cec07g1539 527 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 127 522 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Cec07g1539 527 Pfam Sodium/calcium exchanger protein 190 345 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1539 527 Pfam Sodium/calcium exchanger protein 374 516 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec07g1539 527 FunFam Vacuolar cation/proton exchanger 219 358 - -
Cec07g1539 527 Gene3D - 219 518 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0075 Cec-Chr3:776777 Cec07g1539 Cec-Chr7:30966589 8.90E-81 dispersed
Cec07g1539 Cec-Chr7:30966589 Cec10g0414 Cec-Chr10:4972194 1.10E-152 dispersed
Cec07g1539 Cec-Chr7:30966589 Cec04g0836 Cec-Chr4:28101446 8.60E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1539 K07300 - csv:101219432 807.749