Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1541 ATGGTGAAGAAGTGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGGTCAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTCTCGGCTCTAAATGCCATGTATAATAGTTTAAACTCGCCTCCAATTCTAACACAATGGAGTTCAAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCGTTACTTGCTTAAGCTCACGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGACATTTCTAAGTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATTCACTCCCTCAAAACTTGCAAAAACTAAACCTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTCGCTTATTTCCTTGAACATGAGCCACAACCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGTCCATGTTGGATGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCTCAGAGTTTTAGCAACCTTACCAGTCTGAACACAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGGTGGGTTCCTGAAAGATTGAAGAACATTAATATTCAGGAGGGTGGCAATTCTTGGAGTTTTGGGCTTGCACCCCCACCTCCACCTGGGACACGTCCAGCCAACCAAAATTACAGATATCACAAGGCTGGGAACAATTACAGCCCACTGAGTAGTGCTGGTGGTGGTGGCGGTAGCAATAGATCAGGAATCAGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAGTACTAGCATATCTCCTTGTAAAGAGAAGACCCAAGAGGTCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTACCTAGCGTATCTCCTGCTTCAAATGAAGTGCAAGTTTTTCCAAAGCTTTCGAGTATTTTTCCCCTGAACATCCTCAAATACGAGGCCACATCTTTCCACACCTTTATGCTCTTTCTTCTGAATTCTGATGCCCACAAGCCCAGACCTCAATTATGGATGAAAGAGCTCTCAACCTGGAACCTCAGCTTTAAAGGAACGTCAAGAAAGAGGAATATATGGATTGGCTCTCCCTCATGGGTCAGATTGAAGCATGTTCCCCAACCAATTGCCTGTTTTTATGGACATGGCCTATGGACCCTTCCGGCTCTTTCACTTGATACATTGGCAGAGATGAAACTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGATTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTCGACGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTCCTCCGATAAGTGTGAAATCACATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAGTGTAGAAAACCTTCTCGGTGAGGGATCACTTGGTCGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAAAGAATTGTTGGAATATTTCACGGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCGGAGCATGGCCTGCATTTGCTACTATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTGGGGACGGCCCGTGCTTTGGAGTACCTACATGAAGTTTGTGCCCCGTCTGTTGTTCACAGAAATATTAAGTCATCCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGCCTGGCTAGTTTTATAGCCAATCTAGATCAGGTATTAGATCAGCAGCCAGGATCTGGGTACAGTGCTCCTGAGGTGACAATGTCTGGCCAATATACATTAAAAAGCGATGTATATAGCTTTGGAGTAGTGATGTTGGAACTTCTAAGCGGACGCAAGCCATTTGATAGTTCAAGGCCAAGAGCTGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGATATTGATGCCTTGACGAAAATGGTTGATCCTGCACTTAAAGGCCTCTACCCAGTCAAGTCTCTTTCAAGATTCGCAGATGTTGTAGCTCTCTGTGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCATGGGTCATCTTTTAGAACTGATGATCCTGATACACGCGAGACATCTTAA 2463 43.77 MVKKWSWGEPLLLVSICILGWRVSFINGATDPGDVSALNAMYNSLNSPPILTQWSSSGGDPCGQIWKGVTCLSSRVTEISLSGLGLSGSLGYQLSSLTFLSNLDVSNNNLGPDIPYSLPQNLQKLNLGWNNFSGSIPYSISQMSSLISLNMSHNQLQNQVNDMFWKLSSLSMLDVSFNFLSGALPQSFSNLTSLNTMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTRPANQNYRYHKAGNNYSPLSSAGGGGGSNRSGISGGAIAGILISVLVVGAVLAYLLVKRRPKRSSTDIEKQKHGNLPSVSPASNEVQVFPKLSSIFPLNILKYEATSFHTFMLFLLNSDAHKPRPQLWMKELSTWNLSFKGTSRKRNIWIGSPSWVRLKHVPQPIACFYGHGLWTLPALSLDTLAEMKLVHTSSSFDAKELDSPASINLKPPPIDRHKSFDDNDTSKVPVVKKTNVTPPISVKSHSIADLQMATGSFSVENLLGEGSLGRVYRAQFNDGKVLAVKKIDSAAFPKELLEYFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSSNILLDAEMNPHLSDCGLASFIANLDQVLDQQPGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDPDTRETS 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30982735 30989135 + CePI673135_07g015410.1 Cec07g1541 208320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1541 820 SUPERFAMILY Protein kinase-like (PK-like) 496 787 IPR011009 -
Cec07g1541 820 Gene3D Ribonuclease Inhibitor 31 251 IPR032675 -
Cec07g1541 820 CDD STKc_IRAK 521 790 - -
Cec07g1541 820 Gene3D Transferase(Phosphotransferase) domain 1 594 810 - -
Cec07g1541 820 PANTHER LEUCINE RICH REPEAT KINASE 2 298 789 IPR051420 -
Cec07g1541 820 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 479 592 - -
Cec07g1541 820 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 257 - -
Cec07g1541 820 SUPERFAMILY L domain-like 30 236 - -
Cec07g1541 820 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cec07g1541 820 MobiDBLite consensus disorder prediction 798 820 - -
Cec07g1541 820 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1541 820 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 593 801 - -
Cec07g1541 820 MobiDBLite consensus disorder prediction 805 820 - -
Cec07g1541 820 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515(InterPro)
Cec07g1541 820 Gene3D Phosphorylase Kinase; domain 1 476 592 - -
Cec07g1541 820 Pfam Protein tyrosine and serine/threonine kinase 517 787 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0135 Cec-Chr2:1385850 Cec07g1541 Cec-Chr7:30982735 2.00E-104 dispersed
Cec04g1985 Cec-Chr4:38050326 Cec07g1541 Cec-Chr7:30982735 1.20E-118 dispersed
Cec07g1541 Cec-Chr7:30982735 Cec07g1703 Cec-Chr7:32612945 1.90E-69 dispersed
Cec01g0983 Cec-Chr1:13367733 Cec07g1541 Cec-Chr7:30982735 2.90E-143 transposed
Cec08g0512 Cec-Chr8:15060697 Cec07g1541 Cec-Chr7:30982735 3.90E-164 transposed
Cec10g1755 Cec-Chr10:32243901 Cec07g1541 Cec-Chr7:30982735 9.10E-98 transposed
Cec03g1566 Cec-Chr3:33778080 Cec07g1541 Cec-Chr7:30982735 1.80E-48 wgd
Cec07g1541 Cec-Chr7:30982735 Cec09g0147 Cec-Chr9:1305249 2.30E-192 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72154 PF07714 PK_Tyr_Ser-Thr 1.10E-40 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1541 - - - 0.0