Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1549 ATGGATACCGTCAAGTCCTTCAAGGGCTACGGCAAGGTCGACGAGCTCGAACAGCAAGCTTTCCGCCAAAAGACTCGTCGCCGGCTAATCATACTCCTTCTTTCCATTCTTCTTCTAATTGCTCTCGTCATCGGCGCCGTCGTCGGAATCGTCATTCATAAACGGAACTCTTCTTCTTCATCGCCAACCAGCTCAGCTCCTCCCACCGAGCTCACTCCCGCTGCCTCACTCAAAACTCTCTGTAGTGTTACTCAGTATCCCAGTTCCTGTCAATCCTCTCTCCAAAACTCCAACACTACCGATCCGGTATTTCTCTTCAAGCTTTCTCTCCGAGTTGCCACCGATTCCCTCTCGAAACTTTCCGATTATACCTCTACTCTCAATTCCAATACTGGAGATCCGAAGGTTAAAGCCGCCATTGAAATCTGCCGGAGTGTCTTTGAAGATGCCATTGACACGCTAAACGACACCGTTTCATCCATGGAAGTGGATCACCATAGTGAGAAGTTCTTGTCGCCGTCTAGGATTGAAGATCTGAAAACCTGGCTGAGCACTACAATCACAGATCAAGAAACCTGCCTCGACGCAGTTCGAGATCTAAACCAGACGACGCTTCTCCAAAACTTGCAAACGGCAATGGCGAACTCTACCGAGTTTACTAGCAATAGTTTAGCGATTGTAACGAAAATCCTTGGACTGTTGGCTGATTTCAACATCCCTATCCACCGGAAGCTGATGGGACTCCCGGAGTGGTTAAGCTCCGGCGATCGAAGGCTTCTGCAGGAGAACAACGTGACGGCGCATATGACGGTGTCGAAGGATGGGAAAGGGCACTACACAACGATCAAAGATGCCGTAGCGGCGGTGCCAAAGAAGAGCAAAGAAAGATTCATCATACATGTAAAAGAAGGAATATACGAAGAGAATGTGATTCTGGACAAGAACAAGTGGAACGTTATGATGTATGGAGATGGCAGAACCAAAACCATTGTTTCCGGCCACCTGAACTTCATCGACGGCACTCCCACCTTCTCCACCGCCACTTTTGCTGTTGCTGGCAAAGGGTTCATTGGGAAGGACATGGGGTTCATCAACACGGCCGGTCCAGCCAAGCACCAGGCTGTTGCCTTCCGGTCAGGCTCCGACCTTTCTGTGATGTCCGGATGTTCATTTGATGGCTATCAAGACACACTCTACGCCCATTCAAACCGTCAATTCTACCGAGACTGCGACATCACTGGCACCATCGACTTCATGTTCGGCAACGCCGCCGTGGTGTTCCAGAACTGCAACATCCGGCCGAGGCAGCCACTTCCCAACCAGTTTAACACCATCACAGCCCAAGGCAAAAAGGACATAAACCAAAACTCCGGCATTTCCATTCAGAAATGCACTTTTTCGGCCTACAACGACAGTCTAACCGCCCCCACTTACCTGGGTCGGCCATGGAAGGAGTTTTCCACCACGGTGATTATGCAGTCGGACATCGGAGCATTCCTGCAGCCCGTGGGGTGGAAGGAATGGGTCAGCGGGCAGGACCCACCCAGCAGCATATTTTATGGGGAGTATCAGAATACTGGGCCTGGATCCAGCGTGGACAAGAGGGTTAGATGGGCCGGTTACAGGCCCAGTCTTACGGACGCCGAGGCCGGAAAGTTCACTGTCAGGACCTTCCTCAACGGCGAGGATTGGTTGCCGGCCACCAGTGTAAAGTTTGATACATCCTTGTGA 1731 51.13 MDTVKSFKGYGKVDELEQQAFRQKTRRRLIILLLSILLLIALVIGAVVGIVIHKRNSSSSSPTSSAPPTELTPAASLKTLCSVTQYPSSCQSSLQNSNTTDPVFLFKLSLRVATDSLSKLSDYTSTLNSNTGDPKVKAAIEICRSVFEDAIDTLNDTVSSMEVDHHSEKFLSPSRIEDLKTWLSTTITDQETCLDAVRDLNQTTLLQNLQTAMANSTEFTSNSLAIVTKILGLLADFNIPIHRKLMGLPEWLSSGDRRLLQENNVTAHMTVSKDGKGHYTTIKDAVAAVPKKSKERFIIHVKEGIYEENVILDKNKWNVMMYGDGRTKTIVSGHLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAGPAKHQAVAFRSGSDLSVMSGCSFDGYQDTLYAHSNRQFYRDCDITGTIDFMFGNAAVVFQNCNIRPRQPLPNQFNTITAQGKKDINQNSGISIQKCTFSAYNDSLTAPTYLGRPWKEFSTTVIMQSDIGAFLQPVGWKEWVSGQDPPSSIFYGEYQNTGPGSSVDKRVRWAGYRPSLTDAEAGKFTVRTFLNGEDWLPATSVKFDTSL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31032126 31034310 + CePI673135_07g015490.1 Cec07g1549 208328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1549 576 Gene3D - 262 576 IPR012334 -
Cec07g1549 576 Pfam Plant invertase/pectin methylesterase inhibitor 76 226 IPR006501 GO:0004857(InterPro)
Cec07g1549 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Cec07g1549 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
Cec07g1549 576 SMART PMEI_2 72 226 IPR006501 GO:0004857(InterPro)
Cec07g1549 576 FunFam Pectinesterase 74 231 - -
Cec07g1549 576 FunFam Pectinesterase 262 576 - -
Cec07g1549 576 NCBIfam pectinesterase inhibitor domain 57 230 IPR006501 GO:0004857(InterPro)
Cec07g1549 576 SUPERFAMILY Pectin lyase-like 266 572 IPR011050 -
Cec07g1549 576 CDD PMEI-like_3 79 230 - -
Cec07g1549 576 Pfam Pectinesterase 269 561 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec07g1549 576 PANTHER PECTINESTERASE 29 567 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1787 Cec-Chr1:32331448 Cec07g1549 Cec-Chr7:31032126 8.10E-21 dispersed
Cec02g0064 Cec-Chr2:608126 Cec07g1549 Cec-Chr7:31032126 1.10E-19 dispersed
Cec03g0797 Cec-Chr3:9176741 Cec07g1549 Cec-Chr7:31032126 1.90E-124 dispersed
Cec06g0498 Cec-Chr6:5588404 Cec07g1549 Cec-Chr7:31032126 9.60E-113 dispersed
Cec07g1549 Cec-Chr7:31032126 Cec10g0006 Cec-Chr10:119820 5.00E-109 dispersed
Cec07g1548 Cec-Chr7:31022653 Cec07g1549 Cec-Chr7:31032126 2.10E-99 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1549 - - - 0.0