Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1592 ATGCCAACGGGCGTGCGCGTGGTGGGGCTTATGCGCGCACCGGCCCCAACCATCAGCGCCGCTTCTCTCATTCTCTTCTTCCTCCTCCTCCTCTCATCTTCATGCATAATGGTGGTGTTATCGGCCTCAGACGCCGAAACACTGCTTCAATTCAAGCGGTCATTGACGTCAGCAGTGGCTCTTAACAACTGGAACCCATCGGTCCCTCCTTGCGAGAACAACAAGGCCAATTGGGCGGGTGTGCTTTGTTTGAATGGACATGTTAGGGGTCTAAGGCTTGAGAATATGGGGCTTAAGGGAGAGGTTGATGTGAATTCGTTGGTTTCTATGACTCGCTTGAGGACACTGAGCTTCATGAACAACACATTGGTTGGGGGTTGGCCTCGTGTTATAAGCAAATTAGGGAGTCTACGTTCTGTTTATCTTTCCTATAACCATTTTTCAGGACAAATCCCAGACGATGCTTTTGCGGGTATGAACTTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCCCATTCCCTCATCTCTCGCTTCACTGTCTAGGCTTATGGAGTTGAGACTTGATGGAAACAAATTCAAAGGCCAAGTCCCTCGATTTCAAATTGATACTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAGGGCCCAATTCCTAGTAGCTTATTCCATATGGATCCTTCTTGCTTTGCAGGTAACCGTGATCTGTGTGGGGATCCTCTACCAGCATGTGGGAGTGCGATATCATCCTCAGGGCTTCTAAAAATCGCAGTGATAGTGATAATTTTGGGGTTAACATTAGCAGTAATAGCTGCAATATTCATCATAATGAATTTAAGGAAGCAGCCAGCAGCGGAGCAACTGGGGAAGGGGAATCCAGGGATTATCATTGAAGAGGATCAGAACAAATACATGAATAATGGTAAGCAAATGACGGCGGGGGCGGGGGATGGATACAGATCGACGGAGTCGTCGGTGGCTCAGGCTCCCAAGAGAGGGGCAGAACATGGGAAACTGTTGTTCGTGAGAGATGATAGGGAGAAGTTCGATTTACAAGACCTGCTAAGAGCGTCGGCGGAGATATTGGGGAGTGGCTCATTCGGGTCTTCTTATAAAGCAACTATACTTTGTAATGCGGTGGTGGTGAAGCGTTACAAGCATATGAACAATGTGGGAAGAGAGGAGTTTCATGAGCATATGAGAAGGTTAGGTAGATTGACGCATGCAAATCTACTCCCTTTGGTTGCATATTATTACAGGAAGGAAGAGAAGCTCTTGATTTCCGACTTTGTGGATAATGGGAGTTTGGCCAGCCATCTGCATGGGAACCACAACCTGGAGGAGGCAGGGCTGGATTGGGCAACTAGATTGAAGATCATCAGAGGAATAGCAAGAGGGTTGTCTTACTTGTACACATCGCTGCCAAACATAGTAGCAGCACATGGGCATCTGAAATCTTCAAATGTGTTACTAGACGAGTCGATGGAGCCTCTGCTGACGGATTACGGTCTAAGCCCAGTAGCGAACCTAGAGCAGGGGCAGAGCCTGATGATGGCCTACAAATCCCCAGAGTACGCCCAAATGGGGCGCATAACCAAGAAAACGGACGTGTGGAGCTTCGGAATTGTGATTCTGGAGATGTTGACGGGTAGGTTCCCAGAGAATTACCTAACTCGGAATCACGACACCAAAGCTGACCTGGCGGGTTGGGTCAACAACATGATCAAGGAAAAGAAGACCCCGCAAGTGTTCGACGCAGAGCTAGGGCGAGCCAGGGAGAGCAATAAAGGCGAGTTGCTGAAGATGCTTAAGATTGCATTGAGTTGTTGCGAGGAAGATGTGGATAGAAGGTTGGATCTCAATCAAGTAGTCGCACAAATTGAAGACTTGAACGATACAGATTTTAGTGATAATGATGATGGAGATAACATCTCCCCCACTTCTCGCCATTCTCAAATTCCTGTTTGA 1980 47.17 MPTGVRVVGLMRAPAPTISAASLILFFLLLLSSSCIMVVLSASDAETLLQFKRSLTSAVALNNWNPSVPPCENNKANWAGVLCLNGHVRGLRLENMGLKGEVDVNSLVSMTRLRTLSFMNNTLVGGWPRVISKLGSLRSVYLSYNHFSGQIPDDAFAGMNFLKKVFLTNNEFNGPIPSSLASLSRLMELRLDGNKFKGQVPRFQIDTLKKLNVSNNELEGPIPSSLFHMDPSCFAGNRDLCGDPLPACGSAISSSGLLKIAVIVIILGLTLAVIAAIFIIMNLRKQPAAEQLGKGNPGIIIEEDQNKYMNNGKQMTAGAGDGYRSTESSVAQAPKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHANLLPLVAYYYRKEEKLLISDFVDNGSLASHLHGNHNLEEAGLDWATRLKIIRGIARGLSYLYTSLPNIVAAHGHLKSSNVLLDESMEPLLTDYGLSPVANLEQGQSLMMAYKSPEYAQMGRITKKTDVWSFGIVILEMLTGRFPENYLTRNHDTKADLAGWVNNMIKEKKTPQVFDAELGRARESNKGELLKMLKIALSCCEEDVDRRLDLNQVVAQIEDLNDTDFSDNDDGDNISPTSRHSQIPV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31442467 31446232 - CePI673135_07g015920.1 Cec07g1592 208371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1592 659 FunFam pollen receptor-like kinase 1 329 434 - -
Cec07g1592 659 MobiDBLite consensus disorder prediction 644 659 - -
Cec07g1592 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 39 635 IPR046959 -
Cec07g1592 659 Gene3D Ribonuclease Inhibitor 206 252 IPR032675 -
Cec07g1592 659 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Cec07g1592 659 Pfam Leucine Rich Repeat 136 154 IPR001611 GO:0005515(InterPro)
Cec07g1592 659 Pfam Leucine Rich Repeat 208 229 IPR001611 GO:0005515(InterPro)
Cec07g1592 659 FunFam Pollen receptor-like kinase 1 435 645 - -
Cec07g1592 659 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Cec07g1592 659 Gene3D Ribonuclease Inhibitor 43 205 IPR032675 -
Cec07g1592 659 SUPERFAMILY Protein kinase-like (PK-like) 364 633 IPR011009 -
Cec07g1592 659 Gene3D Transferase(Phosphotransferase) domain 1 435 652 - -
Cec07g1592 659 MobiDBLite consensus disorder prediction 635 659 - -
Cec07g1592 659 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
Cec07g1592 659 Pfam Protein tyrosine and serine/threonine kinase 364 630 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1592 659 SUPERFAMILY L domain-like 68 229 - -
Cec07g1592 659 ProSiteProfiles Protein kinase domain profile. 360 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1611 Cec-Chr6:29688440 Cec07g1592 Cec-Chr7:31442467 6.20E-124 dispersed
Cec07g1592 Cec-Chr7:31442467 Cec08g1291 Cec-Chr8:24893880 1.50E-106 dispersed
Cec01g0205 Cec-Chr1:1988421 Cec07g1592 Cec-Chr7:31442467 7.00E-51 wgd
Cec05g1032 Cec-Chr5:9014177 Cec07g1592 Cec-Chr7:31442467 1.90E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72155 PF07714 PK_Tyr_Ser-Thr 2.00E-30 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1592 K28077 - csv:101203276 1112.83