Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1596 ATGGATTCTTCAATTTCCTCATTCCTTCTGTTCTTTTCCTTTTCCCTTCTCTTCATATTTGGTAATTCCTTCGATTTCTACAGCTCCTGCAGCAATCTCTTCAACTGCGGCCACATCACCAACGTCAGCTTCCCATTCTGGGGCGACGGAAGGCCTGCCGGCTGCGGCAATCCGGCGCTGCAATTGGCATGCGAAGGAAATAAGACAACGATCATAATAAAGGAAATCAAATATCAGATTCTCAAATTCAGCGTCGAAAATAATTCCCAAACGCTCACCATCGCCAGAGCCGATTATATGGGTACCCTCTGCCCTAAGAAATTCATCAACACCACAATCGATTACAATCTCTTCGATATAATTCCTACTTACCGCAACATCACCTTGCTATATTGCTCCTCTTCTCCTCTCGCCGGGCAATTTAACTGTCCTGGATATGAGTTCGGCTTCATTGAGGGGAGCCCCATAGGTCCTAGTCTCTGCAATGTTAGCGTGATCGTACCGGTTTCTTTGAATTTCTTCCCGCCGGTAAGTGATATTGTGAACGCTACTGAGATGTCGATGGCCATCGACGAGGGATTTGAGGTGAGTTTGAAGGATGACGGCGGTGGATGTGGAATTTGTAAGCAGTCGGAGGGGGTTTGCGGTTACGATTTGAGTTCGAATCGAACGACTTGCTATTGTCGCGCCGGCGATTCTATTGATAACGGAGCTTGTAGGAGGCTTCCGGCCGGTGGAGGTCCGGCATCTTCTCCGGGTGGGAATGGATCTAAGAATACATCCCTGATAATAGGCCTTTCTATTGGAGGGGTAACTGTACTAGGCCTATGCTTAGGATGCTTTGCCTTCTACATTACACAACGCAGAAAAAAACATGTTATGAAGTTGAAAAGCAAAGATCTTTCTTCACCTCCTTCAAGTGGAGGCATTCTGACTCCTTCCACCTTTCGCTCTAATAGTATTCCTTCCTATCCTTATTCGAGATCTAATCTCGAAAACGGGAGCTCGTACTTTGGAGCTCAAATCTTTACCTATGCCGAACTCATGGAAGCAACTCATAATTTTGACCGTTCAAGGGAGCTTGGAGATGGTGGTTATGGTACTGTTTACTTTGGAACACTTAGGGATGGAAGGATAGTTGCAGTAAAGCGGCTATACGAGAACAATTATAAACGCGTGGAGCAGTTCACAAATGAAGTTGAGATTCTCTCAAAATTGCAACATCCGAACCTCGTGAAGCTTTTCGGATGCACATCGAGACATAGCCGAGAACTCCTCCTTGTATATGAGTACATTCCTAATGGAACAGTGGCTGACCATCTTCATGGAAAACAAGCAAATTCAGGTCTCCTTAGTTGGTCTGTTAGGCTCAAGATTGCTATAGAGACAGCTAATGCACTGGCTTACCTCCATCGCAACGATATCATTCATCGTGATGTCAAGACCAATAACATTCTTCTTGACAACAACTTCAAAGTAAAAGTAGCTGATTTCGGCCTGTCACGGTTATTTCCCCTCGACGTTACTCATGTTTCAACTGCTCCGCAAGGGACACCAGGCTATGTTGATCCCGAATATTATCAATGCTACCAACTTACCGACAAGAGCGACGTGTATAGCTTTGGAGTTGTTTTGGTTGAGCTTATATCGTCGCTGCAGGCAGTTGACATCAACAGGAACAGAAATGATATCAATTTGTCAAATATGGCTATTGATAGAATTCAAAATCATGCATTGGCTGATTTAGTTGATCCAGATCTTGGGTTTGATAGGGATTATGCAGTGAGGTGTATGATAAAGTCAGTGGCAGAGTTGGCTTACCGATGTCTTCAACAGACAAGGGATGTGAGGCCTTCTATGGATGAAGTGCTGGAAATTCTAAAAGAATTAGAGAATGAAGAATTGACTGCTCGTAAAGCAGAAGTGCTAGATATAGGGTCTGATAATGTGAGACTTTTAAGGAATACATCATCTCTGCTTTCACCAGATTCTGCACCAGTGACAGATAAATGGGTGAAGGTCTTGAACAGAACAACTTAA 2040 44.12 MDSSISSFLLFFSFSLLFIFGNSFDFYSSCSNLFNCGHITNVSFPFWGDGRPAGCGNPALQLACEGNKTTIIIKEIKYQILKFSVENNSQTLTIARADYMGTLCPKKFINTTIDYNLFDIIPTYRNITLLYCSSSPLAGQFNCPGYEFGFIEGSPIGPSLCNVSVIVPVSLNFFPPVSDIVNATEMSMAIDEGFEVSLKDDGGGCGICKQSEGVCGYDLSSNRTTCYCRAGDSIDNGACRRLPAGGGPASSPGGNGSKNTSLIIGLSIGGVTVLGLCLGCFAFYITQRRKKHVMKLKSKDLSSPPSSGGILTPSTFRSNSIPSYPYSRSNLENGSSYFGAQIFTYAELMEATHNFDRSRELGDGGYGTVYFGTLRDGRIVAVKRLYENNYKRVEQFTNEVEILSKLQHPNLVKLFGCTSRHSRELLLVYEYIPNGTVADHLHGKQANSGLLSWSVRLKIAIETANALAYLHRNDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRNRNDINLSNMAIDRIQNHALADLVDPDLGFDRDYAVRCMIKSVAELAYRCLQQTRDVRPSMDEVLEILKELENEELTARKAEVLDIGSDNVRLLRNTSSLLSPDSAPVTDKWVKVLNRTT 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31493977 31499672 - CePI673135_07g015960.1 Cec07g1596 208375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1596 679 Coils Coil 620 640 - -
Cec07g1596 679 SMART serkin_6 355 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1596 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1596 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 332 431 - -
Cec07g1596 679 CDD STKc_IRAK 361 630 - -
Cec07g1596 679 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Cec07g1596 679 ProSiteProfiles Protein kinase domain profile. 355 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1596 679 SUPERFAMILY Protein kinase-like (PK-like) 336 631 IPR011009 -
Cec07g1596 679 Pfam Protein kinase domain 356 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1596 679 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247(InterPro)
Cec07g1596 679 Gene3D Phosphorylase Kinase; domain 1 328 431 - -
Cec07g1596 679 FunFam Wall-associated receptor kinase-like 20 432 640 - -
Cec07g1596 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Cec07g1596 679 Pfam Wall-associated receptor kinase C-terminal 160 230 IPR032872 -
Cec07g1596 679 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 672 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1325 Cec-Chr4:32855860 Cec07g1596 Cec-Chr7:31493977 1.70E-77 dispersed
Cec05g2475 Cec-Chr5:35834800 Cec07g1596 Cec-Chr7:31493977 1.80E-123 dispersed
Cec06g1668 Cec-Chr6:30272827 Cec07g1596 Cec-Chr7:31493977 2.60E-141 dispersed
Cec07g1596 Cec-Chr7:31493977 Cec08g1591 Cec-Chr8:27434217 1.40E-81 dispersed
Cec07g1596 Cec-Chr7:31493977 Cec11g0764 Cec-Chr11:8871465 1.50E-176 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72156 PF00069 Pkinase 4.90E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1596 - - - 0.0