Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1664 ATGGTGTTTTCTCGAGCTTCCCAGCTCGTCGAAATGCAACGAGGAGACTGTTTTACACAGCCACCACCCGTCTCCGGTGGGTTTCCGCTGTTTCGCGACGTTCCGACAGACGACATGTCGTTCGATGCGACGAGTAGTATGAAGGACGACGATATCGGCGTTCCGCTTAGTAAAAGATTTCATGTTGATGAGTCTGCTAGGAATGGAGTAGATGGGTTGGAGAAGAAGGAGGCTGTGATGGCGGGAACGACGACAACAGGACGGGGAGATTATGATAAGAGAAAGAAGATGAGAAGCCGGAGATTTGCTTTTCAAACGAGAAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGAAAATATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGTTACTATAGATGTACACACCAAGGTTGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACTAGAGATGAAGGGGTGGTTGTGACAACTTATGAAGGCATTCATTCTCATCCTATTGAGAAATCCACTGACAACTTTGAGCATATTTTGAGTCAGATGCAAATTTACACTTCTTATTGA 579 44.21 MVFSRASQLVEMQRGDCFTQPPPVSGGFPLFRDVPTDDMSFDATSSMKDDDIGVPLSKRFHVDESARNGVDGLEKKEAVMAGTTTTGRGDYDKRKKMRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTSY 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32229530 32233821 + CePI673135_07g016640.1 Cec07g1664 208443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1664 192 Gene3D WRKY domain 98 172 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1664 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 173 IPR044810 GO:0003700(InterPro)
Cec07g1664 192 SMART WRKY_cls 113 172 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1664 192 FunFam WRKY transcription factor 57 99 173 - -
Cec07g1664 192 SUPERFAMILY WRKY DNA-binding domain 105 172 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1664 192 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec07g1664 192 Pfam WRKY DNA -binding domain 114 171 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1527 Cec-Chr5:19675822 Cec07g1664 Cec-Chr7:32229530 2.10E-47 dispersed
Cec07g0864 Cec-Chr7:21187244 Cec07g1664 Cec-Chr7:32229530 5.30E-30 dispersed
Cec07g1664 Cec-Chr7:32229530 Cec11g0743 Cec-Chr11:8415714 5.80E-30 dispersed
Cec07g1664 Cec-Chr7:32229530 Cec05g0149 Cec-Chr5:1243502 2.40E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29979 PF03106 WRKY 9.30E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1664 - - - 0.0