Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1693 | ATGGCAAACTCGATGGCTAGATCTTTTTTGCAGGTTGCTGCTACGGAAGAGGTTGCTTCTCCTCTCCGAGTTGTTCAGATTGAAGGATTGGTTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCAGCTCTTGTTACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTACCAGTCGACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAATATCAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCACTAACAGCTTTACAGGAGAGAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCGAATTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTTCAACAAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCAGTGGAGCAGCAGAAGTTCCAATTTTATTATCGGAGCCTGACCCGTCAGCAAGCTCAACAACAAGCATGGCTTCAGAAAAGAAGGGCTGAGAACATGATGAGGAAGGCAGCAGGAGAAGAGCCTCTGCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTATTGCAATCAAATTAATGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCCCTTCACGACAATTAA | 1014 | 43.0 | MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMMRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 32524918 | 32528282 | + | CePI673135_07g016930.1 | Cec07g1693 | 208472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1693 | 337 | CDD | MPN_eIF3h | 23 | 286 | IPR027524 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Cec07g1693 | 337 | Hamap | Eukaryotic translation initiation factor 3 subunit H [EIF3H]. | 20 | 337 | IPR027524 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Cec07g1693 | 337 | Gene3D | Cytidine Deaminase, domain 2 | 1 | 214 | - | - | |
Cec07g1693 | 337 | ProSiteProfiles | MPN domain profile. | 25 | 158 | IPR037518 | - | |
Cec07g1693 | 337 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 22 | 127 | IPR000555 | GO:0005515(InterPro)|GO:0008233(InterPro)|GO:0008237(InterPro) | |
Cec07g1693 | 337 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 9 | 328 | IPR050242 | GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005852(PANTHER)|GO:0008237(PANTHER)|GO:0016282(PANTHER)|GO:0042788(PANTHER) | |
Cec07g1693 | 337 | SMART | pad1_6 | 24 | 157 | IPR000555 | GO:0005515(InterPro)|GO:0008233(InterPro)|GO:0008237(InterPro) | |
Cec07g1693 | 337 | FunFam | Eukaryotic translation initiation factor 3 subunit H | 4 | 213 | - | - | |
Cec07g1693 | 337 | Pfam | C-terminal region of eIF3h | 143 | 335 | IPR045810 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1693 | K03247 | - | csv:101211860 | 666.766 |