Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1766 ATGCCTGCAGGCAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCAGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACCGTGCACCACCCACATAGATCGGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCGAGGACGAGACAGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTTAATTTGTGTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCCACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA 930 43.76 MPAGKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVEDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLCLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33245332 33246839 - CePI673135_07g017660.1 Cec07g1766 208545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1766 309 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
Cec07g1766 309 MobiDBLite consensus disorder prediction 1 16 - -
Cec07g1766 309 MobiDBLite consensus disorder prediction 168 185 - -
Cec07g1766 309 MobiDBLite consensus disorder prediction 287 309 - -
Cec07g1766 309 MobiDBLite consensus disorder prediction 1 34 - -
Cec07g1766 309 Pfam TCP family transcription factor 60 175 IPR017887 -
Cec07g1766 309 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 275 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Cec07g1766 309 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1716 Cec-Chr1:31794391 Cec07g1766 Cec-Chr7:33245332 2.60E-31 dispersed
Cec03g0745 Cec-Chr3:8173146 Cec07g1766 Cec-Chr7:33245332 4.20E-24 dispersed
Cec04g2176 Cec-Chr4:39564172 Cec07g1766 Cec-Chr7:33245332 1.30E-24 dispersed
Cec06g1756 Cec-Chr6:31089293 Cec07g1766 Cec-Chr7:33245332 1.30E-33 dispersed
Cec07g1766 Cec-Chr7:33245332 Cec11g1812 Cec-Chr11:32313505 1.50E-19 dispersed
Cec11g0564 Cec-Chr11:6177267 Cec07g1766 Cec-Chr7:33245332 1.40E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29989 PF03634 TCP 5.50E-28 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1766 - - - 0.0