Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec07g1766 | ATGCCTGCAGGCAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCAGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACCGTGCACCACCCACATAGATCGGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCGAGGACGAGACAGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTTAATTTGTGTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCCACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA | 930 | 43.76 | MPAGKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVEDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLCLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 33245332 | 33246839 | - | CePI673135_07g017660.1 | Cec07g1766 | 208545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec07g1766 | 309 | ProSiteProfiles | TCP domain profile. | 60 | 118 | IPR017887 | - | |
Cec07g1766 | 309 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cec07g1766 | 309 | MobiDBLite | consensus disorder prediction | 168 | 185 | - | - | |
Cec07g1766 | 309 | MobiDBLite | consensus disorder prediction | 287 | 309 | - | - | |
Cec07g1766 | 309 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Cec07g1766 | 309 | Pfam | TCP family transcription factor | 60 | 175 | IPR017887 | - | |
Cec07g1766 | 309 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 24 | 275 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER) | |
Cec07g1766 | 309 | MobiDBLite | consensus disorder prediction | 159 | 185 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1716 | Cec-Chr1:31794391 | Cec07g1766 | Cec-Chr7:33245332 | 2.60E-31 | dispersed | |
Cec03g0745 | Cec-Chr3:8173146 | Cec07g1766 | Cec-Chr7:33245332 | 4.20E-24 | dispersed | |
Cec04g2176 | Cec-Chr4:39564172 | Cec07g1766 | Cec-Chr7:33245332 | 1.30E-24 | dispersed | |
Cec06g1756 | Cec-Chr6:31089293 | Cec07g1766 | Cec-Chr7:33245332 | 1.30E-33 | dispersed | |
Cec07g1766 | Cec-Chr7:33245332 | Cec11g1812 | Cec-Chr11:32313505 | 1.50E-19 | dispersed | |
Cec11g0564 | Cec-Chr11:6177267 | Cec07g1766 | Cec-Chr7:33245332 | 1.40E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29989 | PF03634 | TCP | 5.50E-28 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec07g1766 | - | - | - | 0.0 |