Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1787 ATGTACCAATCAACTTCTTCCTCTTCTTCCACTCAGAAATCCATGGCCTCCGCCCACGGCGGCACCGGTCTCACTCGGTACGGTTCCGCGCCTGGATCTCTCCTGACCACGGCGGTCGATTCCGTGATTGGAAGTCGGCAACCGGACTCCGCCGCCACGCTCCGCGGGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCCGCCGATTCCTCCGTCATGGAGTCGTCAAGGAAGGTAGTTCAGTCGTCGTCTACTTCCAACGATCTGAAATCATCGTCGTCCACCGCCGCCGCCTTGCATAGGTCATACGGAATCAACGATTTGGCGTTAGGGGATTTCTCGACGGGTAGAAATTTCAATAGCAATGGTGGTCAATCCTCTTCCTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCTGGATTTCTCGGCCATCTCTCCGTCGCCGAACCAAACGGAGGGTTTTCATTGACCATGGGAGGTGGTGGAAATGGAGTAGGAAGACTAAAGTCTCAAATGAACTTCAGTGGGCAAGATAATTCACTTTCCCAAATCTCTGAAATGAGTGAATGTTTTGTGGAGGCAGCCAATTCCTCAAGCAATGGCCTTCAAAGCAACACCAATTCCACACATTCTTTTGGCCCCTCTGCCTTTACTATGGACTCTTCATGGGACACCTCCAATAATTCCATTGTCTTTGGTGCCCCTCATGCTAAAAGATCCAAGCACCATTCCGATGCCGACTTCTTCACCGGCCTCGAGTCTCAATTTAGCCTGCCACAAACAACTCTAGAAATGGCAGCTGTGGAGAGGTTGCTTCAAATTCCTGAAGATGCTGTTCCTTGTAAGATTCGAGCCAAGCGTGGCTGTGCTACTCACCCTCGGAGTATTGCCGAACGGGAGAGAAGAACTAGAATCAGTGGAAAATTGAAGAAACTTCAAGAGCTTGTTCCCAACATGGATAAGCAAACAAGCTATTCAGACATGTTGGACTTGGCAGTGCAGCATATCAAAGGTCTTCAAAATCAAATTCAGAAGCTTAACAAAGAAGTTGAGAATTGCACCTGTGGAAGCAAAGAATGCTTATAA 1089 50.14 MYQSTSSSSSTQKSMASAHGGTGLTRYGSAPGSLLTTAVDSVIGSRQPDSAATLRGPPSFGGHYFSSADSSVMESSRKVVQSSSTSNDLKSSSSTAAALHRSYGINDLALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGNGVGRLKSQMNFSGQDNSLSQISEMSECFVEAANSSSNGLQSNTNSTHSFGPSAFTMDSSWDTSNNSIVFGAPHAKRSKHHSDADFFTGLESQFSLPQTTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKECL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33520530 33526272 - CePI673135_07g017870.1 Cec07g1787 208566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1787 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 340 IPR011598 GO:0046983(InterPro)
Cec07g1787 362 Pfam Helix-loop-helix DNA-binding domain 296 341 IPR011598 GO:0046983(InterPro)
Cec07g1787 362 CDD bHLH_AtbHLH_like 295 347 IPR045239 -
Cec07g1787 362 SMART finulus 296 346 IPR011598 GO:0046983(InterPro)
Cec07g1787 362 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 349 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cec07g1787 362 Gene3D - 291 359 IPR036638 GO:0046983(InterPro)
Cec07g1787 362 Coils Coil 330 357 - -
Cec07g1787 362 MobiDBLite consensus disorder prediction 1 30 - -
Cec07g1787 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 293 354 IPR036638 GO:0046983(InterPro)
Cec07g1787 362 MobiDBLite consensus disorder prediction 1 19 - -
Cec07g1787 362 FunFam Transcription factor bHLH130 family 291 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1787 Cec-Chr7:33520530 Cec10g1747 Cec-Chr10:32164738 1.70E-35 dispersed
Cec07g1787 Cec-Chr7:33520530 Cec02g1786 Cec-Chr2:35711070 2.80E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29991 PF00010 HLH 9.70E-09 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1787 - - - 0.0