Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1806 ATGACCCAGTTGCTGAATCTAGCTCTTGGAGTGGTTTTAGTTGCAGTTTTGGTGATTTTCCTTCTCATCTTCTTGAACAGAAGGGGAAAGGGGAAGGATAATGATGAATACAATCACATAGAGAGAAAACAGGAGAGGGAGAAAGCGGAGGAAGAGAAAGAAGAATTGGTGAGTTTTCAAGGTGGACAAGACCTTACCATTGTGGATATTTTGGAAGCTCCTGGGGAAGTAATTGGGAAAGCCAACCATGGAACTTTGTATAAGGCTTATTTGCAAGGAAGCAACACAGTAAGGCTGCTAAGGTTTCTGAGGCCAGTTTGCACTGCTGGTCTTGAAGACTTTGTCAGTGAAATGGAGTTTTTAGGTTCCATAAGACACCCAAATTTGGTGCCTCTCTTGGGATTCTACTCAGGTCCAAGAGCAGAGAAGCTTCTCATTCATCCATTTTACAGGCGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAATGGCGACTCACACCGATGGGGAGTTATAAACAAGATCTCGATTGGTATTGCGAAAGGATTGGATCATCTTCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTTCAATCGAAAAATGTTCTTTTGGATAGGTATTATGAACCGTATGTCTCCGATTTCGGCCTACATCTACTGCTGAATTCCCCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGACATCTATAGTTATGGGGTGATATTACTCGAGTTACTTTCGGGGAAGGAACCGATCAACGAAAAGCCAAATCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCTGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTGTATAGCAGCATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACAAAAGCTCAATGAAATCGGAACGTAG 1071 42.48 MTQLLNLALGVVLVAVLVIFLLIFLNRRGKGKDNDEYNHIERKQEREKAEEEKEELVSFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSNTVRLLRFLRPVCTAGLEDFVSEMEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISIGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRYYEPYVSDFGLHLLLNSPSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPNPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLQKLNEIGT 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33714724 33715994 - CePI673135_07g018060.1 Cec07g1806 208585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1806 356 SUPERFAMILY Protein kinase-like (PK-like) 75 351 IPR011009 -
Cec07g1806 356 Coils Coil 34 54 - -
Cec07g1806 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 355 IPR052451 -
Cec07g1806 356 Gene3D Transferase(Phosphotransferase) domain 1 151 356 - -
Cec07g1806 356 Gene3D Phosphorylase Kinase; domain 1 37 149 - -
Cec07g1806 356 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1806 356 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1806 Cec-Chr7:33714724 Cec09g0907 Cec-Chr9:8588162 4.20E-58 dispersed
Cec01g0465 Cec-Chr1:4797820 Cec07g1806 Cec-Chr7:33714724 6.90E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72166 PF07714 PK_Tyr_Ser-Thr 7.40E-31 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1806 - - - 0.0