Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec07g1840 ATGATTAAGGCTTTGGCTTTTTGGGTTGGCGTGGAGAAATTGCCAATAGAACTTCTCCATTGGGACAAGGGTGATTATAATTATATTGTTGGAATCGTGGGTCACGATTCTTCTCTTTCCTTCCGCTGCCCCAAATCTACTTCTTCCTCTCAACAGAGTTTCGAAGTCTGGTCAATCCTCGTTATTGCGGCCTTTTGTCTTCTTGAAGGATTTGTTGGCATGAGAACGATGGGAGAACTCTATCTTATAATTCTAATACTGGCTTGCCTTCATTATCTTGCACTGTCTGATTTTCAAGGTGATGCACTCTTTGCATTGAAGAATGCATTGAATGCAACATCAAATCAGCTCACAGATTGGAACCCAAATCAAGTCAATCCATGTACTTGGTCCAATGTTATATGTAGTGGAAGCAATGTGATCTCTGTATCCTTGTCCACAATGGGATTTACTGGAACCTTGTCTCCACGAATTGGACTTCTAAAATCACTTTCAACCCTGATTTTGCAGGGAAATTACATAACTGGAGAGATACCTAAGGATTTTGGAAACCTGACAAATTTGGTTAGTTTGGATTTGGGAAATAACAGCCTAACTGGCCAAATACCATCGTCCCTTGGTAACCTTAAGAAACTACAGTTCCTAACTCTGAGTCAAAATCGTCTAACGGGGACTATTCCAGAGTCACTTTCAACCCTTCCTAGCTTGATCAATCTTCTGCTTGATTCAAATGATCTCAGTGGTCCAATTCCGCAGCAGTTATTTCAAGTTCCAAAATTCAACTTTTCTGCAAACAAGTTAAATTGTGGCGGGAAGTCTCTTCATGCCTGTGCTTCAGACAGTACAAACTCAGGTTCTTCAAATAAACCCAAGGTTGGCCTTATAGTTGGAATAATTGCTGGGTTTACCGTTGCTCTTCTTTTGGTGGGAGTATTATTTTTCTTGTCCAAGGGTAGATATAAAAGCTACAAGCGCGAAGTGTTTGTAGATGTTGCAGGTGAAGTTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAGCTAGCCACAGAAAACTTTAGTGAGAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTACAAAGGGGTGCTTGCAGATGGCGCCAAAGTTGCTGTGAAACGGTTGACTGATTATGAAAGTCCAGGGGGAGATGCTGCTTTTCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTATTGCGTCTCATTGGGTTCTGTACAACTCAGACAGAACGCCTATTGGTGTATCCCTTTATGCAGAACTTGAGTGTTGCCTACCGTCTTCGAGAACTTAAGCCCGGAGAGGCTGTTCTAGATTGGCCTACTCGGAAACGGGTGGCATTGGGCACAGCTCGTGGTTTAGAGTATCTTCATGAACATTGCAACCCAAAGATTATTCATCGAGATGTCAAGGCAGCTAATGTATTGCTTGATGAAGATTTTGAAGCAGTTGTTGGCGATTTTGGCTTAGCAAAGTTGGTTGATGTTAGAAAGACCAATGTCACTACTCAAGTTCGAGGGACAATGGGTCACATAGCACCGGAGTACTTATCTACTGGAAAATCATCCGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTTGTAACGGGGCAACGTGCAATCGACTTCTCACGCTTAGAAGAAGAAGACGATGTTTTACTGCTCGACCATGTTAAGAAACTAGAAAGGGAGAAACGACTTGATGCCATTGTCGATCGAAATCTAAAAAACTACAACATTCAAGAGGTGGAGATGATGATTCAAGTTGCATTGCTGTGTACACAGCCATGCTCGGATGACCGCCCAGCAATGTCACAAGTCGTTCGGATGCTCGAGGGAGAGGGATTGGCAGAGAGGTGGGAAGAATGGCAGCATTTGGAGGTGACTCGCAGACAAGAGTATGAGAGACTGCAGAGAAGATTTGAATGGGGAGAAGATTCAATACATAGACAGGATGCAATCCAGTTGTCTGCAGCACCACCACTCTCTGACCTTCGTTTTCCTCCGCCCGCCCTCTTCCTCTTTCCTATTTATCTTATTTTGATTTGCAGGTTTAAGAATCTTGAGGATAATTTTCTTCCTCTTTCTTCTGCCCCAAATCTCCAGAAATTGAAATGA 2181 42.55 MIKALAFWVGVEKLPIELLHWDKGDYNYIVGIVGHDSSLSFRCPKSTSSSQQSFEVWSILVIAAFCLLEGFVGMRTMGELYLIILILACLHYLALSDFQGDALFALKNALNATSNQLTDWNPNQVNPCTWSNVICSGSNVISVSLSTMGFTGTLSPRIGLLKSLSTLILQGNYITGEIPKDFGNLTNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSQNRLTGTIPESLSTLPSLINLLLDSNDLSGPIPQQLFQVPKFNFSANKLNCGGKSLHACASDSTNSGSSNKPKVGLIVGIIAGFTVALLLVGVLFFLSKGRYKSYKREVFVDVAGEVDRRIAFGQLKRFAWRELQLATENFSEKNVLGQGGFGKVYKGVLADGAKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKNYNIQEVEMMIQVALLCTQPCSDDRPAMSQVVRMLEGEGLAERWEEWQHLEVTRRQEYERLQRRFEWGEDSIHRQDAIQLSAAPPLSDLRFPPPALFLFPIYLILICRFKNLEDNFLPLSSAPNLQKLK 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34073170 34092723 + CePI673135_07g018400.1 Cec07g1840 208619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec07g1840 726 FunFam Somatic embryogenesis receptor kinase 1 328 435 - -
Cec07g1840 726 Gene3D Ribonuclease Inhibitor 97 278 IPR032675 -
Cec07g1840 726 FunFam Somatic embryogenesis receptor-like kinase 1 436 652 - -
Cec07g1840 726 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515(InterPro)
Cec07g1840 726 SMART serkin_6 359 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1840 726 Pfam Leucine rich repeat N-terminal domain 98 136 IPR013210 -
Cec07g1840 726 Gene3D Phosphorylase Kinase; domain 1 328 435 - -
Cec07g1840 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec07g1840 726 SUPERFAMILY Protein kinase-like (PK-like) 339 633 IPR011009 -
Cec07g1840 726 FunFam Putative LRR receptor-like serine/threonine-protein kinase 96 279 - -
Cec07g1840 726 Pfam Protein kinase domain 360 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1840 726 Gene3D Transferase(Phosphotransferase) domain 1 436 652 - -
Cec07g1840 726 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 82 671 - -
Cec07g1840 726 ProSiteProfiles Protein kinase domain profile. 359 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec07g1840 726 SUPERFAMILY L domain-like 99 267 - -
Cec07g1840 726 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1840 Cec-Chr7:34073170 Cec10g0926 Cec-Chr10:20516035 3.70E-125 dispersed
Cec07g1840 Cec-Chr7:34073170 Cec07g1841 Cec-Chr7:34092787 5.50E-230 tandem
Cec02g0011 Cec-Chr2:127174 Cec07g1840 Cec-Chr7:34073170 2.70E-167 transposed
Cec08g0305 Cec-Chr8:6684058 Cec07g1840 Cec-Chr7:34073170 1.00E-137 transposed
Cec01g0518 Cec-Chr1:5287350 Cec07g1840 Cec-Chr7:34073170 1.30E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72167 PF00069 Pkinase 3.10E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec07g1840 - - - 0.0