Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0101 ATGCAATTACAATTGGATGAGTTTGAAATCCCAAATGCAGTACTCGGGAAAATATATTGGGGGATGAGACGCCAACCATACCTACAACATAAGGATGAGAAAGAGGTGGAGGCCCTTCGATGGCAAGCACTTAACAAACTTCAAGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAGAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAAATTATAATTGGAGATATCAGTATTGCATGTGCCTTTTGGGGAGAGCCTCCGTCTGCACCGTATTCGTCCCTCTCACCTTCAACTGGTCGTTGTTGCACCCCCAATCGCCATCGCACACCAAGTTTTTGGACATTGTGGTCGCTCCACCAGTCTCCTCTCTCAAATTTTTTTTTTTTGGTTTTTCGTGCGTCTCCATCTCCCCCAGTCTCCCATACCGTCGCCGGCCGTTCTCCTACGCCGTCGTGTGCCTCGCCGAGACCGTCCGCCTGCTGTCTGTTTTTCCGTTTGCTGCTTCAACTTTGCAGCAATTTACTGGTGCTGTGGCGAAAATGGTTACTGCAGCGGTTGAGAATCGGCGAAGCGATATGGTAATTGAAGGTAACGAACAGAAGCCGAAGAACATTGTATCTGATGGGTTCGATGCCAATTATCTCAAAATTTACTACGGGAAGCTTTTCCCGCATGCTGATTTTTTTAAATGGATGTCTTATGGAAATGATGGCAAGCATCCGGGCAGTGACCAATCTTATTTTGGCCGAAGAGAGTTTTCATTCACCTTAGATAATGATATTTATCTACGATTCCAATCTTTCAACAGTCTGTCAGAAATGGAAAATTCGATCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACATGCATATGCTGGCGATAATGTATTTACTCCAGTGGAGAGAGAGCTGGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACAGCTGCTATCAAAGTGATTGATACTACCCTCCGAGATGACTTTGGATTTAACCACATTCTATGGGTATTTAGTGGTCGACGTGGTGTTCACTGTTGGGTCTGTGATGGCAAAGCTAGAAGGTTGTCCAATGAACAGCGAGCTGCCATTGCTGAATATTTCCATTTATATCAGGGTAATGAAAGTAGTTGCAAGAAAATTTCTCTAACTGGTCCAGTTCTTCATCCATTTCTCGCGAGATCATACATAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACTTCAGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCCTCTAAAAATGATGTTAACTCAGTAAGATGGGAACAACTGAAAAATATGTTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCCAGGCTTGACTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCTATTGACCCTGAACACTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCGTAGAAGAACTTAATGCTGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAGTCTATTAGGTTTTTCAGATCCGCATTTTTACAGCCGTTACTGAAATCATGCAAGGAGGAGATAGAATCTTCGTACAATGCGAAAGTGCAACAGTCTAAAAATTCTCTGAGTTGGTAG 1920 42.5 MQLQLDEFEIPNAVLGKIYWGMRRQPYLQHKDEKEVEALRWQALNKLQEMHDLNSNDRVKVAEALFRDVYKIDLFLAAPNYNWRYQYCMCLLGRASVCTVFVPLTFNWSLLHPQSPSHTKFLDIVVAPPVSSLKFFFFGFSCVSISPSLPYRRRPFSYAVVCLAETVRLLSVFPFAASTLQQFTGAVAKMVTAAVENRRSDMVIEGNEQKPKNIVSDGFDANYLKIYYGKLFPHADFFKWMSYGNDGKHPGSDQSYFGRREFSFTLDNDIYLRFQSFNSLSEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNESSCKKISLTGPVLHPFLARSYIEVLKDSFESQLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNSVRWEQLKNMLQSGKHKAQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPEHCDEFDPTTVPTVAQLVEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNSLSW 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1921001 1934261 + CePI673135_08g001010.1 Cec08g0101 208743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0101 639 SUPERFAMILY Prim-pol domain 221 584 - -
Cec08g0101 639 PANTHER DNA PRIMASE SMALL SUBUNIT 197 625 - GO:0003896(PANTHER)|GO:0005658(PANTHER)|GO:0006269(PANTHER)
Cec08g0101 639 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 225 580 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Cec08g0101 639 Gene3D DNA primase, PRIM domain 212 620 - -
Cec08g0101 639 Pfam DNA primase small subunit 326 559 IPR002755 GO:0003896(InterPro)|GO:0006269(InterPro)
Cec08g0101 639 CDD AE_Prim_S 233 568 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Cec08g0101 639 FunFam DNA primase 211 620 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0101 K02684 - csv:101203146 888.641