Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0152 ATGGAACCCAATTATAGAGGCGTTCGTAAGCGTAAATGGGGAAAATGGGTCTCCGAAATCCGTGAACCGGGCAAAAAAACCCGAATCTGGCTCGGTAGTTACCATCTCCCGGAAATGGCAGCCGCTGCCTACGACGTCGCTGCCCTCCACCTCCGCGGCCCCGACGCCCGCCTCAACTTCCCCGAGCTGGCCGACTCCTTCCCTCGCCCTGCCAGCTCCTCCCCTGACCACATTCAAGCAGCCGCCCACATGGCTGCATTGCGGCTCGCCAATACCAAGCCGCCGGACCCTCCGGCGCCGGTTCGAGTGGGGCTGTCCCCTAGCCAGATTCAAGCCATTAATGAGTCGCCGTTGGATTCTCCCACCATGTGGATGCAGATGGCGGCGGAGGCGCTTTCTTTACAGCCTCATGACTGGGACGAAGAATATAACATGCACAATCATCATTCCATTTGGGATTATTCTTCAATTTAA 474 57.17 MEPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNFPELADSFPRPASSSPDHIQAAAHMAALRLANTKPPDPPAPVRVGLSPSQIQAINESPLDSPTMWMQMAAEALSLQPHDWDEEYNMHNHHSIWDYSSI 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2914168 2914641 - CePI673135_08g001520.1 Cec08g0152 208794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0152 157 Pfam AP2 domain 3 53 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 Gene3D AP2/ERF domain 4 62 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 PRINTS Ethylene responsive element binding protein signature 5 16 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 PRINTS Ethylene responsive element binding protein signature 43 63 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 SMART rav1_2 4 67 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 SUPERFAMILY DNA-binding domain 4 62 IPR016177 GO:0003677(InterPro)
Cec08g0152 157 CDD AP2 3 63 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0152 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 108 IPR051032 -
Cec08g0152 157 FunFam Ethylene-responsive transcription factor 2 4 62 - -
Cec08g0152 157 ProSiteProfiles AP2/ERF domain profile. 4 61 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1387 Cec-Chr4:33511712 Cec08g0152 Cec-Chr8:2914168 2.90E-20 dispersed
Cec05g2232 Cec-Chr5:33814343 Cec08g0152 Cec-Chr8:2914168 1.10E-20 dispersed
Cec08g0066 Cec-Chr8:1010762 Cec08g0152 Cec-Chr8:2914168 1.70E-24 dispersed
Cec08g0152 Cec-Chr8:2914168 Cec11g0235 Cec-Chr11:2512522 8.40E-27 dispersed
Cec08g0152 Cec-Chr8:2914168 Cec08g0157 Cec-Chr8:3036294 7.30E-47 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30003 PF00847 AP2 3.20E-13 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0152 - - - 0.0